Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CLK3P49761 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.59■□□□□ 0.89
CLK3P49761 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CLK3P49761 AC139530.1-201ENST00000575312 1977 ntBASIC20.59■□□□□ 0.89
CLK3P49761 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLK3P49761 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLK3P49761 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLK3P49761 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CLK3P49761 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CLK3P49761 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLK3P49761 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLK3P49761 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CLK3P49761 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.58■□□□□ 0.89
CLK3P49761 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLK3P49761 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
CLK3P49761 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLK3P49761 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CLK3P49761 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLK3P49761 FP325331.1-202ENST00000623531 1380 ntBASIC20.58■□□□□ 0.88
CLK3P49761 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLK3P49761 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CLK3P49761 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLK3P49761 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.57■□□□□ 0.88
CLK3P49761 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CLK3P49761 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLK3P49761 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLK3P49761 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLK3P49761 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLK3P49761 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLK3P49761 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLK3P49761 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CLK3P49761 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CLK3P49761 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CLK3P49761 AC144652.1-201ENST00000609974 1624 ntBASIC20.56■□□□□ 0.88
CLK3P49761 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CLK3P49761 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CLK3P49761 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLK3P49761 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CLK3P49761 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CLK3P49761 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLK3P49761 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CLK3P49761 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.56■□□□□ 0.88
CLK3P49761 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CLK3P49761 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLK3P49761 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.56■□□□□ 0.88
CLK3P49761 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.56■□□□□ 0.88
CLK3P49761 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CLK3P49761 AC092171.4-201ENST00000609130 632 ntBASIC20.56■□□□□ 0.88
CLK3P49761 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.56■□□□□ 0.88
CLK3P49761 AC241377.3-202ENST00000626088 1088 ntBASIC20.56■□□□□ 0.88
CLK3P49761 AC241585.3-202ENST00000628937 1088 ntBASIC20.56■□□□□ 0.88
CLK3P49761 AC245100.8-202ENST00000629247 1058 ntBASIC20.56■□□□□ 0.88
CLK3P49761 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.56■□□□□ 0.88
CLK3P49761 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.56■□□□□ 0.88
CLK3P49761 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CLK3P49761 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLK3P49761 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CLK3P49761 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLK3P49761 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLK3P49761 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLK3P49761 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CLK3P49761 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CLK3P49761 C17orf82-201ENST00000623772 1530 ntBASIC20.55■□□□□ 0.88
CLK3P49761 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.55■□□□□ 0.88
CLK3P49761 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLK3P49761 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
CLK3P49761 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
CLK3P49761 C11orf96-202ENST00000528572 1834 ntBASIC20.55■□□□□ 0.88
CLK3P49761 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLK3P49761 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLK3P49761 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLK3P49761 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CLK3P49761 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLK3P49761 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLK3P49761 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLK3P49761 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.54■□□□□ 0.88
CLK3P49761 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLK3P49761 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.54■□□□□ 0.88
CLK3P49761 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLK3P49761 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.54■□□□□ 0.88
CLK3P49761 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLK3P49761 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CLK3P49761 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CLK3P49761 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLK3P49761 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CLK3P49761 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.54■□□□□ 0.88
CLK3P49761 AC008406.3-201ENST00000620001 1374 ntBASIC20.54■□□□□ 0.88
CLK3P49761 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLK3P49761 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLK3P49761 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLK3P49761 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
CLK3P49761 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CLK3P49761 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.54■□□□□ 0.88
CLK3P49761 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.53■□□□□ 0.88
CLK3P49761 AC079630.1-202ENST00000618127 1840 ntBASIC20.53■□□□□ 0.88
CLK3P49761 AC092053.2-201ENST00000640557 1818 ntBASIC20.53■□□□□ 0.88
CLK3P49761 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLK3P49761 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.53■□□□□ 0.88
CLK3P49761 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLK3P49761 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms