Protein–RNA interactions for Protein: P43235

CTSK, Cathepsin K, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSKP43235 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CTSKP43235 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.73■■□□□ 1.07
CTSKP43235 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CTSKP43235 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CTSKP43235 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CTSKP43235 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
CTSKP43235 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
CTSKP43235 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.72■■□□□ 1.07
CTSKP43235 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CTSKP43235 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.72■■□□□ 1.07
CTSKP43235 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CTSKP43235 AC006015.1-201ENST00000429970 570 ntBASIC21.72■■□□□ 1.07
CTSKP43235 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.72■■□□□ 1.07
CTSKP43235 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.72■■□□□ 1.07
CTSKP43235 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CTSKP43235 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CTSKP43235 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CTSKP43235 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CTSKP43235 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CTSKP43235 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.71■■□□□ 1.07
CTSKP43235 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
CTSKP43235 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.71■■□□□ 1.07
CTSKP43235 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.71■■□□□ 1.07
CTSKP43235 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CTSKP43235 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CTSKP43235 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
CTSKP43235 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CTSKP43235 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.7■■□□□ 1.06
CTSKP43235 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CTSKP43235 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.7■■□□□ 1.06
CTSKP43235 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.7■■□□□ 1.06
CTSKP43235 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.7■■□□□ 1.06
CTSKP43235 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.7■■□□□ 1.06
CTSKP43235 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.7■■□□□ 1.06
CTSKP43235 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.7■■□□□ 1.06
CTSKP43235 AC080038.1-201ENST00000611274 1154 ntBASIC21.7■■□□□ 1.06
CTSKP43235 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.7■■□□□ 1.06
CTSKP43235 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CTSKP43235 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.7■■□□□ 1.06
CTSKP43235 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CTSKP43235 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CTSKP43235 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
CTSKP43235 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.69■■□□□ 1.06
CTSKP43235 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CTSKP43235 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CTSKP43235 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CTSKP43235 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
CTSKP43235 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CTSKP43235 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CTSKP43235 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CTSKP43235 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CTSKP43235 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CTSKP43235 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CTSKP43235 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CTSKP43235 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CTSKP43235 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.68■■□□□ 1.06
CTSKP43235 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.68■■□□□ 1.06
CTSKP43235 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
CTSKP43235 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
CTSKP43235 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CTSKP43235 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CTSKP43235 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CTSKP43235 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
CTSKP43235 AC079834.2-201ENST00000609776 1949 ntBASIC21.67■■□□□ 1.06
CTSKP43235 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CTSKP43235 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CTSKP43235 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.67■■□□□ 1.06
CTSKP43235 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CTSKP43235 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
CTSKP43235 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CTSKP43235 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CTSKP43235 HLA-L-209ENST00000420110 1011 ntBASIC21.67■■□□□ 1.06
CTSKP43235 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.67■■□□□ 1.06
CTSKP43235 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.67■■□□□ 1.06
CTSKP43235 AC137761.2-201ENST00000561729 223 ntBASIC21.67■■□□□ 1.06
CTSKP43235 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.67■■□□□ 1.06
CTSKP43235 AC145350.3-201ENST00000569033 163 ntBASIC21.67■■□□□ 1.06
CTSKP43235 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.67■■□□□ 1.06
CTSKP43235 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CTSKP43235 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
CTSKP43235 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CTSKP43235 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
CTSKP43235 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CTSKP43235 LINC00543-201ENST00000567234 1845 ntBASIC21.66■■□□□ 1.06
CTSKP43235 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
CTSKP43235 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CTSKP43235 AC016769.1-201ENST00000409132 1010 ntBASIC21.66■■□□□ 1.06
CTSKP43235 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CTSKP43235 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CTSKP43235 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CTSKP43235 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.66■■□□□ 1.06
CTSKP43235 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.66■■□□□ 1.06
CTSKP43235 AC068587.7-201ENST00000641602 218 ntBASIC21.66■■□□□ 1.06
CTSKP43235 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.66■■□□□ 1.06
CTSKP43235 BX005040.4-201ENST00000637145 1518 ntBASIC21.65■■□□□ 1.06
CTSKP43235 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.65■■□□□ 1.06
CTSKP43235 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.65■■□□□ 1.06
CTSKP43235 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CTSKP43235 AP004607.4-201ENST00000530158 1459 ntBASIC21.65■■□□□ 1.06
CTSKP43235 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms