Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.29■□□□□ 0.68
HOXC12P31275 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
HOXC12P31275 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HOXC12P31275 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HOXC12P31275 YBX1P1-201ENST00000445822 960 ntBASIC19.29■□□□□ 0.68
HOXC12P31275 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HOXC12P31275 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.29■□□□□ 0.68
HOXC12P31275 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
HOXC12P31275 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HOXC12P31275 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
HOXC12P31275 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HOXC12P31275 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.29■□□□□ 0.68
HOXC12P31275 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
HOXC12P31275 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
HOXC12P31275 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.29■□□□□ 0.68
HOXC12P31275 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HOXC12P31275 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
HOXC12P31275 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HOXC12P31275 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HOXC12P31275 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
HOXC12P31275 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
HOXC12P31275 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.28■□□□□ 0.68
HOXC12P31275 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
HOXC12P31275 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
HOXC12P31275 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.28■□□□□ 0.68
HOXC12P31275 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.28■□□□□ 0.68
HOXC12P31275 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.28■□□□□ 0.68
HOXC12P31275 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
HOXC12P31275 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.28■□□□□ 0.68
HOXC12P31275 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.28■□□□□ 0.68
HOXC12P31275 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HOXC12P31275 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
HOXC12P31275 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.28■□□□□ 0.68
HOXC12P31275 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.28■□□□□ 0.68
HOXC12P31275 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HOXC12P31275 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HOXC12P31275 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HOXC12P31275 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
HOXC12P31275 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HOXC12P31275 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HOXC12P31275 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
HOXC12P31275 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.27■□□□□ 0.68
HOXC12P31275 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.27■□□□□ 0.68
HOXC12P31275 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.27■□□□□ 0.68
HOXC12P31275 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
HOXC12P31275 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.27■□□□□ 0.68
HOXC12P31275 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HOXC12P31275 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
HOXC12P31275 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
HOXC12P31275 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
HOXC12P31275 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
HOXC12P31275 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HOXC12P31275 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXC12P31275 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.26■□□□□ 0.67
HOXC12P31275 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
HOXC12P31275 ID1-201ENST00000376105 1233 ntBASIC19.26■□□□□ 0.67
HOXC12P31275 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXC12P31275 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.26■□□□□ 0.67
HOXC12P31275 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.26■□□□□ 0.67
HOXC12P31275 AC068587.7-201ENST00000641602 218 ntBASIC19.26■□□□□ 0.67
HOXC12P31275 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
HOXC12P31275 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXC12P31275 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
HOXC12P31275 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXC12P31275 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
HOXC12P31275 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
HOXC12P31275 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXC12P31275 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXC12P31275 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.25■□□□□ 0.67
HOXC12P31275 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.25■□□□□ 0.67
HOXC12P31275 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXC12P31275 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
HOXC12P31275 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.25■□□□□ 0.67
HOXC12P31275 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.25■□□□□ 0.67
HOXC12P31275 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.25■□□□□ 0.67
HOXC12P31275 AL031602.1-201ENST00000633169 911 ntBASIC19.25■□□□□ 0.67
HOXC12P31275 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC19.25■□□□□ 0.67
HOXC12P31275 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
HOXC12P31275 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXC12P31275 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
HOXC12P31275 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.24■□□□□ 0.67
HOXC12P31275 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXC12P31275 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
HOXC12P31275 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HOXC12P31275 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.24■□□□□ 0.67
HOXC12P31275 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.24■□□□□ 0.67
HOXC12P31275 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.24■□□□□ 0.67
HOXC12P31275 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
HOXC12P31275 IGHV3-19-201ENST00000521488 291 ntBASIC19.24■□□□□ 0.67
HOXC12P31275 DUX4L2-201ENST00000561772 1275 ntBASIC19.24■□□□□ 0.67
HOXC12P31275 AC010525.1-201ENST00000585559 441 ntBASIC19.24■□□□□ 0.67
HOXC12P31275 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.24■□□□□ 0.67
HOXC12P31275 DUX4L6-201ENST00000626483 1275 ntBASIC19.24■□□□□ 0.67
HOXC12P31275 DUX4L1-201ENST00000627662 1275 ntBASIC19.24■□□□□ 0.67
HOXC12P31275 DUX4L8-201ENST00000629013 1275 ntBASIC19.24■□□□□ 0.67
HOXC12P31275 DUX4L3-201ENST00000630187 1275 ntBASIC19.24■□□□□ 0.67
HOXC12P31275 DUX4L7-201ENST00000630678 1275 ntBASIC19.24■□□□□ 0.67
HOXC12P31275 DUX4L5-201ENST00000630834 1275 ntBASIC19.24■□□□□ 0.67
HOXC12P31275 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXC12P31275 TSPY26P-201ENST00000476365 1326 ntBASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms