Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.86■■□□□ 1.09
KRT4P19013 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
KRT4P19013 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.86■■□□□ 1.09
KRT4P19013 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.86■■□□□ 1.09
KRT4P19013 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.86■■□□□ 1.09
KRT4P19013 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.86■■□□□ 1.09
KRT4P19013 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.86■■□□□ 1.09
KRT4P19013 AC009086.3-201ENST00000623486 1008 ntBASIC21.86■■□□□ 1.09
KRT4P19013 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
KRT4P19013 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.86■■□□□ 1.09
KRT4P19013 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.86■■□□□ 1.09
KRT4P19013 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
KRT4P19013 SLC25A24-204ENST00000569674 2357 ntBASIC21.85■■□□□ 1.09
KRT4P19013 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
KRT4P19013 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.85■■□□□ 1.09
KRT4P19013 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
KRT4P19013 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
KRT4P19013 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
KRT4P19013 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
KRT4P19013 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
KRT4P19013 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
KRT4P19013 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
KRT4P19013 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.85■■□□□ 1.09
KRT4P19013 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
KRT4P19013 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
KRT4P19013 AC244015.2-201ENST00000616358 1861 ntBASIC21.85■■□□□ 1.09
KRT4P19013 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
KRT4P19013 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
KRT4P19013 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.85■■□□□ 1.09
KRT4P19013 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
KRT4P19013 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
KRT4P19013 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
KRT4P19013 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.84■■□□□ 1.09
KRT4P19013 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.84■■□□□ 1.09
KRT4P19013 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
KRT4P19013 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
KRT4P19013 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.84■■□□□ 1.09
KRT4P19013 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
KRT4P19013 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
KRT4P19013 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
KRT4P19013 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.84■■□□□ 1.09
KRT4P19013 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.84■■□□□ 1.09
KRT4P19013 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
KRT4P19013 AC005703.6-201ENST00000623265 1329 ntBASIC21.83■■□□□ 1.09
KRT4P19013 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
KRT4P19013 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
KRT4P19013 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
KRT4P19013 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
KRT4P19013 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
KRT4P19013 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.83■■□□□ 1.09
KRT4P19013 MIR4508-201ENST00000584178 70 ntBASIC21.83■■□□□ 1.09
KRT4P19013 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21.83■■□□□ 1.09
KRT4P19013 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
KRT4P19013 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.83■■□□□ 1.09
KRT4P19013 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
KRT4P19013 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.08
KRT4P19013 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
KRT4P19013 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
KRT4P19013 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
KRT4P19013 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
KRT4P19013 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
KRT4P19013 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.82■■□□□ 1.08
KRT4P19013 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
KRT4P19013 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
KRT4P19013 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.82■■□□□ 1.08
KRT4P19013 DUX4L4-201ENST00000566884 1269 ntBASIC21.82■■□□□ 1.08
KRT4P19013 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.82■■□□□ 1.08
KRT4P19013 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.82■■□□□ 1.08
KRT4P19013 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
KRT4P19013 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
KRT4P19013 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
KRT4P19013 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.81■■□□□ 1.08
KRT4P19013 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
KRT4P19013 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
KRT4P19013 TSPY13P-201ENST00000338964 914 ntBASIC21.81■■□□□ 1.08
KRT4P19013 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
KRT4P19013 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
KRT4P19013 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.81■■□□□ 1.08
KRT4P19013 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.8■■□□□ 1.08
KRT4P19013 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.8■■□□□ 1.08
KRT4P19013 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.8■■□□□ 1.08
KRT4P19013 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.8■■□□□ 1.08
KRT4P19013 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
KRT4P19013 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
KRT4P19013 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
KRT4P19013 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.8■■□□□ 1.08
KRT4P19013 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
KRT4P19013 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
KRT4P19013 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
KRT4P19013 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
KRT4P19013 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
KRT4P19013 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.8■■□□□ 1.08
KRT4P19013 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
KRT4P19013 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
KRT4P19013 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
KRT4P19013 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
KRT4P19013 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.79■■□□□ 1.08
KRT4P19013 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
KRT4P19013 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
KRT4P19013 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms