Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
DEFA4P12838 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
DEFA4P12838 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
DEFA4P12838 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DEFA4P12838 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
DEFA4P12838 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DEFA4P12838 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
DEFA4P12838 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DEFA4P12838 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DEFA4P12838 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DEFA4P12838 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
DEFA4P12838 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
DEFA4P12838 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC17.65■□□□□ 0.42
DEFA4P12838 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DEFA4P12838 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
DEFA4P12838 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DEFA4P12838 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC17.65■□□□□ 0.42
DEFA4P12838 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
DEFA4P12838 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
DEFA4P12838 AL353803.4-201ENST00000565882 1934 ntBASIC17.64■□□□□ 0.42
DEFA4P12838 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC17.64■□□□□ 0.42
DEFA4P12838 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DEFA4P12838 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DEFA4P12838 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DEFA4P12838 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
DEFA4P12838 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DEFA4P12838 AC010997.5-201ENST00000609182 354 ntBASIC17.64■□□□□ 0.41
DEFA4P12838 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
DEFA4P12838 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DEFA4P12838 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC17.64■□□□□ 0.41
DEFA4P12838 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC17.64■□□□□ 0.41
DEFA4P12838 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
DEFA4P12838 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
DEFA4P12838 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DEFA4P12838 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC17.63■□□□□ 0.41
DEFA4P12838 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.63■□□□□ 0.41
DEFA4P12838 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC17.63■□□□□ 0.41
DEFA4P12838 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC17.63■□□□□ 0.41
DEFA4P12838 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC17.63■□□□□ 0.41
DEFA4P12838 AL451085.2-201ENST00000605085 799 ntBASIC17.63■□□□□ 0.41
DEFA4P12838 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC17.63■□□□□ 0.41
DEFA4P12838 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC17.63■□□□□ 0.41
DEFA4P12838 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DEFA4P12838 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
DEFA4P12838 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC17.63■□□□□ 0.41
DEFA4P12838 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DEFA4P12838 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DEFA4P12838 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC17.62■□□□□ 0.41
DEFA4P12838 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
DEFA4P12838 AC144652.1-201ENST00000609974 1624 ntBASIC17.62■□□□□ 0.41
DEFA4P12838 GCA-201ENST00000233612 1694 ntTSL 2 BASIC17.62■□□□□ 0.41
DEFA4P12838 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
DEFA4P12838 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DEFA4P12838 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DEFA4P12838 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
DEFA4P12838 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
DEFA4P12838 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DEFA4P12838 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DEFA4P12838 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC17.62■□□□□ 0.41
DEFA4P12838 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DEFA4P12838 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
DEFA4P12838 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
DEFA4P12838 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
DEFA4P12838 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.61■□□□□ 0.41
DEFA4P12838 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
DEFA4P12838 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC17.61■□□□□ 0.41
DEFA4P12838 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC17.61■□□□□ 0.41
DEFA4P12838 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
DEFA4P12838 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
DEFA4P12838 EXOG-217ENST00000630638 197 ntTSL 5 BASIC17.61■□□□□ 0.41
DEFA4P12838 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
DEFA4P12838 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DEFA4P12838 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
DEFA4P12838 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
DEFA4P12838 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
DEFA4P12838 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DEFA4P12838 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
DEFA4P12838 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
DEFA4P12838 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DEFA4P12838 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
DEFA4P12838 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC17.6■□□□□ 0.41
DEFA4P12838 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DEFA4P12838 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC17.6■□□□□ 0.41
DEFA4P12838 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
DEFA4P12838 CD72-202ENST00000378430 585 ntTSL 3 BASIC17.6■□□□□ 0.41
DEFA4P12838 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC17.6■□□□□ 0.41
DEFA4P12838 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
DEFA4P12838 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
DEFA4P12838 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
DEFA4P12838 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DEFA4P12838 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DEFA4P12838 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
DEFA4P12838 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DEFA4P12838 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
DEFA4P12838 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DEFA4P12838 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
DEFA4P12838 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
DEFA4P12838 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
DEFA4P12838 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DEFA4P12838 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms