Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.62■□□□□ 0.89
RAB40ALP0C0E4 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.62■□□□□ 0.89
RAB40ALP0C0E4 AC092437.1-201ENST00000624794 1048 ntBASIC20.62■□□□□ 0.89
RAB40ALP0C0E4 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAB40ALP0C0E4 AC068473.5-201ENST00000616428 2072 ntBASIC20.62■□□□□ 0.89
RAB40ALP0C0E4 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RAB40ALP0C0E4 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAB40ALP0C0E4 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAB40ALP0C0E4 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAB40ALP0C0E4 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAB40ALP0C0E4 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAB40ALP0C0E4 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.61■□□□□ 0.89
RAB40ALP0C0E4 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAB40ALP0C0E4 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.61■□□□□ 0.89
RAB40ALP0C0E4 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.61■□□□□ 0.89
RAB40ALP0C0E4 TPRG1LP1-201ENST00000598702 760 ntBASIC20.61■□□□□ 0.89
RAB40ALP0C0E4 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
RAB40ALP0C0E4 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.61■□□□□ 0.89
RAB40ALP0C0E4 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAB40ALP0C0E4 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAB40ALP0C0E4 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAB40ALP0C0E4 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAB40ALP0C0E4 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
RAB40ALP0C0E4 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RAB40ALP0C0E4 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RAB40ALP0C0E4 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RAB40ALP0C0E4 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RAB40ALP0C0E4 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RAB40ALP0C0E4 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.6■□□□□ 0.89
RAB40ALP0C0E4 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RAB40ALP0C0E4 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.6■□□□□ 0.89
RAB40ALP0C0E4 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RAB40ALP0C0E4 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.59■□□□□ 0.89
RAB40ALP0C0E4 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAB40ALP0C0E4 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAB40ALP0C0E4 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.59■□□□□ 0.89
RAB40ALP0C0E4 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.59■□□□□ 0.89
RAB40ALP0C0E4 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.59■□□□□ 0.89
RAB40ALP0C0E4 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RAB40ALP0C0E4 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
RAB40ALP0C0E4 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RAB40ALP0C0E4 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.59■□□□□ 0.89
RAB40ALP0C0E4 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAB40ALP0C0E4 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAB40ALP0C0E4 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.59■□□□□ 0.89
RAB40ALP0C0E4 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.59■□□□□ 0.89
RAB40ALP0C0E4 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.59■□□□□ 0.89
RAB40ALP0C0E4 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.59■□□□□ 0.89
RAB40ALP0C0E4 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.59■□□□□ 0.89
RAB40ALP0C0E4 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAB40ALP0C0E4 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAB40ALP0C0E4 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAB40ALP0C0E4 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
RAB40ALP0C0E4 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAB40ALP0C0E4 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
RAB40ALP0C0E4 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
RAB40ALP0C0E4 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RAB40ALP0C0E4 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.58■□□□□ 0.89
RAB40ALP0C0E4 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.58■□□□□ 0.89
RAB40ALP0C0E4 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RAB40ALP0C0E4 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RAB40ALP0C0E4 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RAB40ALP0C0E4 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
RAB40ALP0C0E4 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.58■□□□□ 0.89
RAB40ALP0C0E4 AC090192.1-201ENST00000517740 490 ntBASIC20.58■□□□□ 0.89
RAB40ALP0C0E4 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.58■□□□□ 0.89
RAB40ALP0C0E4 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.58■□□□□ 0.89
RAB40ALP0C0E4 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.58■□□□□ 0.89
RAB40ALP0C0E4 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
RAB40ALP0C0E4 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RAB40ALP0C0E4 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.58■□□□□ 0.88
RAB40ALP0C0E4 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RAB40ALP0C0E4 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.58■□□□□ 0.88
RAB40ALP0C0E4 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
RAB40ALP0C0E4 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.58■□□□□ 0.88
RAB40ALP0C0E4 BX005040.4-201ENST00000637145 1518 ntBASIC20.58■□□□□ 0.88
RAB40ALP0C0E4 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.58■□□□□ 0.88
RAB40ALP0C0E4 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
RAB40ALP0C0E4 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.57■□□□□ 0.88
RAB40ALP0C0E4 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
RAB40ALP0C0E4 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.57■□□□□ 0.88
RAB40ALP0C0E4 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAB40ALP0C0E4 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAB40ALP0C0E4 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
RAB40ALP0C0E4 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RAB40ALP0C0E4 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAB40ALP0C0E4 ABCB10P4-201ENST00000566803 2184 ntBASIC20.57■□□□□ 0.88
RAB40ALP0C0E4 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAB40ALP0C0E4 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAB40ALP0C0E4 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RAB40ALP0C0E4 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.56■□□□□ 0.88
RAB40ALP0C0E4 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RAB40ALP0C0E4 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.56■□□□□ 0.88
RAB40ALP0C0E4 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.56■□□□□ 0.88
RAB40ALP0C0E4 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.56■□□□□ 0.88
RAB40ALP0C0E4 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.56■□□□□ 0.88
RAB40ALP0C0E4 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.56■□□□□ 0.88
RAB40ALP0C0E4 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
RAB40ALP0C0E4 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.55■□□□□ 0.88
RAB40ALP0C0E4 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms