Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLPTM1O96005 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CLPTM1O96005 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CLPTM1O96005 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CLPTM1O96005 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
CLPTM1O96005 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLPTM1O96005 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
CLPTM1O96005 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.49■□□□□ 0.87
CLPTM1O96005 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLPTM1O96005 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
CLPTM1O96005 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
CLPTM1O96005 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CLPTM1O96005 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CLPTM1O96005 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.49■□□□□ 0.87
CLPTM1O96005 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.49■□□□□ 0.87
CLPTM1O96005 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLPTM1O96005 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.49■□□□□ 0.87
CLPTM1O96005 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
CLPTM1O96005 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLPTM1O96005 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CLPTM1O96005 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLPTM1O96005 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CLPTM1O96005 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLPTM1O96005 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLPTM1O96005 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CLPTM1O96005 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLPTM1O96005 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.48■□□□□ 0.87
CLPTM1O96005 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CLPTM1O96005 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CLPTM1O96005 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CLPTM1O96005 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.48■□□□□ 0.87
CLPTM1O96005 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CLPTM1O96005 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLPTM1O96005 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLPTM1O96005 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLPTM1O96005 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CLPTM1O96005 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.47■□□□□ 0.87
CLPTM1O96005 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CLPTM1O96005 KRT18P10-201ENST00000388836 1287 ntBASIC20.47■□□□□ 0.87
CLPTM1O96005 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.47■□□□□ 0.87
CLPTM1O96005 PVT1_1.1-201ENST00000615125 194 ntBASIC20.47■□□□□ 0.87
CLPTM1O96005 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLPTM1O96005 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.47■□□□□ 0.87
CLPTM1O96005 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CLPTM1O96005 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLPTM1O96005 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.47■□□□□ 0.87
CLPTM1O96005 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CLPTM1O96005 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.47■□□□□ 0.87
CLPTM1O96005 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLPTM1O96005 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.47■□□□□ 0.87
CLPTM1O96005 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CLPTM1O96005 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLPTM1O96005 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
CLPTM1O96005 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CLPTM1O96005 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLPTM1O96005 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLPTM1O96005 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.46■□□□□ 0.87
CLPTM1O96005 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLPTM1O96005 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLPTM1O96005 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLPTM1O96005 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLPTM1O96005 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CLPTM1O96005 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLPTM1O96005 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLPTM1O96005 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CLPTM1O96005 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLPTM1O96005 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLPTM1O96005 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CLPTM1O96005 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLPTM1O96005 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
CLPTM1O96005 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.46■□□□□ 0.87
CLPTM1O96005 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLPTM1O96005 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CLPTM1O96005 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLPTM1O96005 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLPTM1O96005 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.45■□□□□ 0.86
CLPTM1O96005 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLPTM1O96005 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLPTM1O96005 AC074183.2-201ENST00000623112 922 ntBASIC20.45■□□□□ 0.86
CLPTM1O96005 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLPTM1O96005 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CLPTM1O96005 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.44■□□□□ 0.86
CLPTM1O96005 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.44■□□□□ 0.86
CLPTM1O96005 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.44■□□□□ 0.86
CLPTM1O96005 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLPTM1O96005 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.44■□□□□ 0.86
CLPTM1O96005 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CLPTM1O96005 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
CLPTM1O96005 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLPTM1O96005 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.44■□□□□ 0.86
CLPTM1O96005 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLPTM1O96005 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.44■□□□□ 0.86
CLPTM1O96005 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLPTM1O96005 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLPTM1O96005 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.43■□□□□ 0.86
CLPTM1O96005 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.43■□□□□ 0.86
CLPTM1O96005 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLPTM1O96005 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.43■□□□□ 0.86
CLPTM1O96005 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.43■□□□□ 0.86
CLPTM1O96005 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms