Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ABCA1O95477 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ABCA1O95477 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
ABCA1O95477 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC18.25■□□□□ 0.51
ABCA1O95477 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ABCA1O95477 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ABCA1O95477 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ABCA1O95477 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ABCA1O95477 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.25■□□□□ 0.51
ABCA1O95477 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ABCA1O95477 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ABCA1O95477 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
ABCA1O95477 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
ABCA1O95477 AL109923.1-201ENST00000618799 583 ntBASIC18.25■□□□□ 0.51
ABCA1O95477 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ABCA1O95477 BX005040.4-201ENST00000637145 1518 ntBASIC18.25■□□□□ 0.51
ABCA1O95477 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ABCA1O95477 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ABCA1O95477 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ABCA1O95477 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.24■□□□□ 0.51
ABCA1O95477 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ABCA1O95477 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC18.24■□□□□ 0.51
ABCA1O95477 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ABCA1O95477 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ABCA1O95477 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ABCA1O95477 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
ABCA1O95477 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ABCA1O95477 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
ABCA1O95477 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
ABCA1O95477 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ABCA1O95477 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
ABCA1O95477 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.24■□□□□ 0.51
ABCA1O95477 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.24■□□□□ 0.51
ABCA1O95477 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ABCA1O95477 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC18.24■□□□□ 0.51
ABCA1O95477 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
ABCA1O95477 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
ABCA1O95477 AC144652.1-201ENST00000609974 1624 ntBASIC18.24■□□□□ 0.51
ABCA1O95477 SHD-204ENST00000599689 1729 ntTSL 5 BASIC18.23■□□□□ 0.51
ABCA1O95477 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
ABCA1O95477 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ABCA1O95477 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.23■□□□□ 0.51
ABCA1O95477 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ABCA1O95477 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ABCA1O95477 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC18.23■□□□□ 0.51
ABCA1O95477 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ABCA1O95477 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ABCA1O95477 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ABCA1O95477 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.23■□□□□ 0.51
ABCA1O95477 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
ABCA1O95477 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ABCA1O95477 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ABCA1O95477 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ABCA1O95477 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ABCA1O95477 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
ABCA1O95477 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.22■□□□□ 0.51
ABCA1O95477 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
ABCA1O95477 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ABCA1O95477 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ABCA1O95477 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ABCA1O95477 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ABCA1O95477 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.21■□□□□ 0.51
ABCA1O95477 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
ABCA1O95477 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.21■□□□□ 0.51
ABCA1O95477 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.21■□□□□ 0.51
ABCA1O95477 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
ABCA1O95477 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
ABCA1O95477 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ABCA1O95477 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ABCA1O95477 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.21■□□□□ 0.51
ABCA1O95477 EI24-213ENST00000618552 1747 ntTSL 5 BASIC18.21■□□□□ 0.51
ABCA1O95477 LINC01529-204ENST00000636474 1715 ntBASIC18.21■□□□□ 0.51
ABCA1O95477 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ABCA1O95477 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ABCA1O95477 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.21■□□□□ 0.51
ABCA1O95477 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.21■□□□□ 0.51
ABCA1O95477 MFSD11-216ENST00000590393 1141 ntBASIC18.21■□□□□ 0.51
ABCA1O95477 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.21■□□□□ 0.51
ABCA1O95477 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.21■□□□□ 0.51
ABCA1O95477 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
ABCA1O95477 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
ABCA1O95477 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
ABCA1O95477 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ABCA1O95477 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ABCA1O95477 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ABCA1O95477 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
ABCA1O95477 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ABCA1O95477 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.2■□□□□ 0.5
ABCA1O95477 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.2■□□□□ 0.5
ABCA1O95477 AIRN-201ENST00000601203 4374 ntBASIC18.2■□□□□ 0.5
ABCA1O95477 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ABCA1O95477 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ABCA1O95477 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ABCA1O95477 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ABCA1O95477 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
ABCA1O95477 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ABCA1O95477 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ABCA1O95477 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.2■□□□□ 0.5
ABCA1O95477 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ABCA1O95477 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms