Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
ALX3O95076 AC144652.1-201ENST00000609974 1624 ntBASIC19.19■□□□□ 0.66
ALX3O95076 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ALX3O95076 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
ALX3O95076 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ALX3O95076 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ALX3O95076 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
ALX3O95076 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ALX3O95076 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.19■□□□□ 0.66
ALX3O95076 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ALX3O95076 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.19■□□□□ 0.66
ALX3O95076 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
ALX3O95076 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ALX3O95076 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
ALX3O95076 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ALX3O95076 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ALX3O95076 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ALX3O95076 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.18■□□□□ 0.66
ALX3O95076 MIR6722-201ENST00000617286 78 ntBASIC19.18■□□□□ 0.66
ALX3O95076 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.18■□□□□ 0.66
ALX3O95076 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.18■□□□□ 0.66
ALX3O95076 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ALX3O95076 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ALX3O95076 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
ALX3O95076 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ALX3O95076 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
ALX3O95076 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
ALX3O95076 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ALX3O95076 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ALX3O95076 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.17■□□□□ 0.66
ALX3O95076 AC103724.3-201ENST00000564481 992 ntBASIC19.17■□□□□ 0.66
ALX3O95076 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.17■□□□□ 0.66
ALX3O95076 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ALX3O95076 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
ALX3O95076 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ALX3O95076 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ALX3O95076 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ALX3O95076 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.16■□□□□ 0.66
ALX3O95076 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.16■□□□□ 0.66
ALX3O95076 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.16■□□□□ 0.66
ALX3O95076 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ALX3O95076 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ALX3O95076 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ALX3O95076 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.16■□□□□ 0.66
ALX3O95076 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
ALX3O95076 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.16■□□□□ 0.66
ALX3O95076 YBX1P4-201ENST00000392794 808 ntBASIC19.16■□□□□ 0.66
ALX3O95076 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.16■□□□□ 0.66
ALX3O95076 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.16■□□□□ 0.66
ALX3O95076 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.16■□□□□ 0.66
ALX3O95076 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.16■□□□□ 0.66
ALX3O95076 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ALX3O95076 FP325331.1-202ENST00000623531 1380 ntBASIC19.16■□□□□ 0.66
ALX3O95076 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ALX3O95076 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.16■□□□□ 0.66
ALX3O95076 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ALX3O95076 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
ALX3O95076 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ALX3O95076 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.15■□□□□ 0.66
ALX3O95076 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ALX3O95076 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
ALX3O95076 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ALX3O95076 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.15■□□□□ 0.66
ALX3O95076 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ALX3O95076 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
ALX3O95076 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ALX3O95076 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ALX3O95076 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.15■□□□□ 0.66
ALX3O95076 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.15■□□□□ 0.66
ALX3O95076 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.15■□□□□ 0.66
ALX3O95076 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ALX3O95076 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.15■□□□□ 0.66
ALX3O95076 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
ALX3O95076 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
ALX3O95076 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ALX3O95076 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
ALX3O95076 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ALX3O95076 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ALX3O95076 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
ALX3O95076 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.14■□□□□ 0.66
ALX3O95076 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
ALX3O95076 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ALX3O95076 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.14■□□□□ 0.65
ALX3O95076 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.14■□□□□ 0.65
ALX3O95076 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.14■□□□□ 0.65
ALX3O95076 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ALX3O95076 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
ALX3O95076 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ALX3O95076 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ALX3O95076 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ALX3O95076 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ALX3O95076 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
ALX3O95076 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
ALX3O95076 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ALX3O95076 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC19.13■□□□□ 0.65
ALX3O95076 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.13■□□□□ 0.65
ALX3O95076 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.13■□□□□ 0.65
ALX3O95076 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.13■□□□□ 0.65
ALX3O95076 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ALX3O95076 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms