Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLPXO76031 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLPXO76031 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.72■□□□□ 0.75
CLPXO76031 AF106564.1-201ENST00000607058 2553 ntBASIC19.72■□□□□ 0.75
CLPXO76031 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CLPXO76031 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLPXO76031 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC19.72■□□□□ 0.75
CLPXO76031 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLPXO76031 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLPXO76031 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLPXO76031 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.72■□□□□ 0.75
CLPXO76031 AL592293.1-201ENST00000502889 1188 ntBASIC19.72■□□□□ 0.75
CLPXO76031 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC19.72■□□□□ 0.75
CLPXO76031 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLPXO76031 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLPXO76031 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLPXO76031 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CLPXO76031 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLPXO76031 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CLPXO76031 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CLPXO76031 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLPXO76031 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLPXO76031 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.71■□□□□ 0.75
CLPXO76031 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLPXO76031 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLPXO76031 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.71■□□□□ 0.75
CLPXO76031 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CLPXO76031 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC19.71■□□□□ 0.75
CLPXO76031 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLPXO76031 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLPXO76031 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLPXO76031 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.71■□□□□ 0.75
CLPXO76031 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLPXO76031 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CLPXO76031 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLPXO76031 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLPXO76031 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.7■□□□□ 0.74
CLPXO76031 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLPXO76031 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
CLPXO76031 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLPXO76031 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLPXO76031 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLPXO76031 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLPXO76031 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLPXO76031 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CLPXO76031 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLPXO76031 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.7■□□□□ 0.74
CLPXO76031 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLPXO76031 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CLPXO76031 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.69■□□□□ 0.74
CLPXO76031 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLPXO76031 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLPXO76031 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC19.69■□□□□ 0.74
CLPXO76031 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CLPXO76031 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLPXO76031 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLPXO76031 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.69■□□□□ 0.74
CLPXO76031 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.69■□□□□ 0.74
CLPXO76031 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLPXO76031 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CLPXO76031 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
CLPXO76031 AC244015.2-201ENST00000616358 1861 ntBASIC19.69■□□□□ 0.74
CLPXO76031 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLPXO76031 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.68■□□□□ 0.74
CLPXO76031 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.68■□□□□ 0.74
CLPXO76031 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.68■□□□□ 0.74
CLPXO76031 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.68■□□□□ 0.74
CLPXO76031 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLPXO76031 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLPXO76031 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLPXO76031 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLPXO76031 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLPXO76031 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CLPXO76031 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.68■□□□□ 0.74
CLPXO76031 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.68■□□□□ 0.74
CLPXO76031 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLPXO76031 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLPXO76031 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLPXO76031 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.68■□□□□ 0.74
CLPXO76031 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.67■□□□□ 0.74
CLPXO76031 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLPXO76031 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLPXO76031 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.67■□□□□ 0.74
CLPXO76031 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLPXO76031 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLPXO76031 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLPXO76031 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLPXO76031 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLPXO76031 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLPXO76031 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLPXO76031 KRT18P10-201ENST00000388836 1287 ntBASIC19.67■□□□□ 0.74
CLPXO76031 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLPXO76031 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CLPXO76031 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLPXO76031 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLPXO76031 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLPXO76031 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLPXO76031 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.66■□□□□ 0.74
CLPXO76031 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLPXO76031 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms