Protein–RNA interactions for Protein: O75954

TSPAN9, Tetraspanin-9, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9O75954 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TSPAN9O75954 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TSPAN9O75954 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TSPAN9O75954 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TSPAN9O75954 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TSPAN9O75954 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TSPAN9O75954 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TSPAN9O75954 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TSPAN9O75954 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
TSPAN9O75954 SENP5-202ENST00000419026 973 ntTSL 3 BASIC18.6■□□□□ 0.57
TSPAN9O75954 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.6■□□□□ 0.57
TSPAN9O75954 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.6■□□□□ 0.57
TSPAN9O75954 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC18.6■□□□□ 0.57
TSPAN9O75954 MTDHP2-201ENST00000601468 714 ntBASIC18.6■□□□□ 0.57
TSPAN9O75954 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.6■□□□□ 0.57
TSPAN9O75954 MIR6724-1-201ENST00000616420 92 ntBASIC18.6■□□□□ 0.57
TSPAN9O75954 MIR6724-2-201ENST00000616483 92 ntBASIC18.6■□□□□ 0.57
TSPAN9O75954 MIR6724-4-201ENST00000617390 92 ntBASIC18.6■□□□□ 0.57
TSPAN9O75954 MIR6724-3-201ENST00000622482 92 ntBASIC18.6■□□□□ 0.57
TSPAN9O75954 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.6■□□□□ 0.57
TSPAN9O75954 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
TSPAN9O75954 LINC00526-201ENST00000581067 1875 ntBASIC18.6■□□□□ 0.57
TSPAN9O75954 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TSPAN9O75954 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TSPAN9O75954 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC18.59■□□□□ 0.57
TSPAN9O75954 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TSPAN9O75954 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.59■□□□□ 0.57
TSPAN9O75954 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.59■□□□□ 0.57
TSPAN9O75954 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC18.59■□□□□ 0.57
TSPAN9O75954 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TSPAN9O75954 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.59■□□□□ 0.57
TSPAN9O75954 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TSPAN9O75954 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
TSPAN9O75954 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TSPAN9O75954 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC18.59■□□□□ 0.57
TSPAN9O75954 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
TSPAN9O75954 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TSPAN9O75954 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC18.59■□□□□ 0.57
TSPAN9O75954 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TSPAN9O75954 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TSPAN9O75954 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TSPAN9O75954 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
TSPAN9O75954 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TSPAN9O75954 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TSPAN9O75954 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.58■□□□□ 0.56
TSPAN9O75954 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TSPAN9O75954 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.58■□□□□ 0.56
TSPAN9O75954 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TSPAN9O75954 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.56
TSPAN9O75954 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
TSPAN9O75954 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.58■□□□□ 0.56
TSPAN9O75954 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TSPAN9O75954 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TSPAN9O75954 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
TSPAN9O75954 SLC6A10P-202ENST00000431994 2058 ntBASIC18.58■□□□□ 0.56
TSPAN9O75954 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TSPAN9O75954 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TSPAN9O75954 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TSPAN9O75954 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TSPAN9O75954 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TSPAN9O75954 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TSPAN9O75954 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TSPAN9O75954 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TSPAN9O75954 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.57■□□□□ 0.56
TSPAN9O75954 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.57■□□□□ 0.56
TSPAN9O75954 MIR3621-201ENST00000580529 85 ntBASIC18.57■□□□□ 0.56
TSPAN9O75954 MIR6089-201ENST00000616698 64 ntBASIC18.57■□□□□ 0.56
TSPAN9O75954 EXOG-217ENST00000630638 197 ntTSL 5 BASIC18.57■□□□□ 0.56
TSPAN9O75954 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TSPAN9O75954 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TSPAN9O75954 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
TSPAN9O75954 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
TSPAN9O75954 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TSPAN9O75954 AF131216.4-201ENST00000638924 1588 ntBASIC18.56■□□□□ 0.56
TSPAN9O75954 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TSPAN9O75954 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TSPAN9O75954 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TSPAN9O75954 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TSPAN9O75954 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
TSPAN9O75954 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TSPAN9O75954 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TSPAN9O75954 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TSPAN9O75954 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.56■□□□□ 0.56
TSPAN9O75954 AL117332.1-201ENST00000622628 974 ntBASIC18.56■□□□□ 0.56
TSPAN9O75954 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TSPAN9O75954 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TSPAN9O75954 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
TSPAN9O75954 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TSPAN9O75954 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
TSPAN9O75954 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TSPAN9O75954 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TSPAN9O75954 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TSPAN9O75954 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TSPAN9O75954 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TSPAN9O75954 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TSPAN9O75954 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.55■□□□□ 0.56
TSPAN9O75954 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.55■□□□□ 0.56
TSPAN9O75954 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TSPAN9O75954 AC131281.2-201ENST00000520478 145 ntBASIC18.55■□□□□ 0.56
TSPAN9O75954 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms