Protein–RNA interactions for Protein: O43676

NDUFB3, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3, humanhuman

Predictions only

Length 98 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB3O43676 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
NDUFB3O43676 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.2■□□□□ 0.5
NDUFB3O43676 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
NDUFB3O43676 AL031602.1-201ENST00000633169 911 ntBASIC18.2■□□□□ 0.5
NDUFB3O43676 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.2■□□□□ 0.5
NDUFB3O43676 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NDUFB3O43676 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NDUFB3O43676 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NDUFB3O43676 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
NDUFB3O43676 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NDUFB3O43676 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
NDUFB3O43676 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.19■□□□□ 0.5
NDUFB3O43676 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NDUFB3O43676 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NDUFB3O43676 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NDUFB3O43676 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.19■□□□□ 0.5
NDUFB3O43676 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NDUFB3O43676 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.19■□□□□ 0.5
NDUFB3O43676 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NDUFB3O43676 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
NDUFB3O43676 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NDUFB3O43676 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NDUFB3O43676 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.19■□□□□ 0.5
NDUFB3O43676 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC18.19■□□□□ 0.5
NDUFB3O43676 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
NDUFB3O43676 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
NDUFB3O43676 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
NDUFB3O43676 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
NDUFB3O43676 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.18■□□□□ 0.5
NDUFB3O43676 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.18■□□□□ 0.5
NDUFB3O43676 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.18■□□□□ 0.5
NDUFB3O43676 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
NDUFB3O43676 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
NDUFB3O43676 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
NDUFB3O43676 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.17■□□□□ 0.5
NDUFB3O43676 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NDUFB3O43676 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NDUFB3O43676 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
NDUFB3O43676 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NDUFB3O43676 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
NDUFB3O43676 AC010141.3-201ENST00000456659 717 ntBASIC18.17■□□□□ 0.5
NDUFB3O43676 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.17■□□□□ 0.5
NDUFB3O43676 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NDUFB3O43676 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NDUFB3O43676 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NDUFB3O43676 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NDUFB3O43676 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
NDUFB3O43676 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NDUFB3O43676 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NDUFB3O43676 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NDUFB3O43676 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NDUFB3O43676 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
NDUFB3O43676 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NDUFB3O43676 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NDUFB3O43676 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.16■□□□□ 0.5
NDUFB3O43676 IGHV3-19-201ENST00000521488 291 ntBASIC18.16■□□□□ 0.5
NDUFB3O43676 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.16■□□□□ 0.5
NDUFB3O43676 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NDUFB3O43676 ESRRAP2-201ENST00000418437 1549 ntBASIC18.16■□□□□ 0.5
NDUFB3O43676 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
NDUFB3O43676 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.16■□□□□ 0.5
NDUFB3O43676 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
NDUFB3O43676 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NDUFB3O43676 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
NDUFB3O43676 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
NDUFB3O43676 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NDUFB3O43676 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
NDUFB3O43676 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NDUFB3O43676 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
NDUFB3O43676 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NDUFB3O43676 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NDUFB3O43676 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NDUFB3O43676 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NDUFB3O43676 TSPY26P-201ENST00000476365 1326 ntBASIC18.15■□□□□ 0.5
NDUFB3O43676 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NDUFB3O43676 C1orf229-201ENST00000623686 2258 ntBASIC18.15■□□□□ 0.5
NDUFB3O43676 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.15■□□□□ 0.5
NDUFB3O43676 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
NDUFB3O43676 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
NDUFB3O43676 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
NDUFB3O43676 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
NDUFB3O43676 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.14■□□□□ 0.5
NDUFB3O43676 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
NDUFB3O43676 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NDUFB3O43676 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
NDUFB3O43676 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NDUFB3O43676 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NDUFB3O43676 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NDUFB3O43676 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.14■□□□□ 0.49
NDUFB3O43676 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.14■□□□□ 0.49
NDUFB3O43676 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NDUFB3O43676 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NDUFB3O43676 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
NDUFB3O43676 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.14■□□□□ 0.49
NDUFB3O43676 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.13■□□□□ 0.49
NDUFB3O43676 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NDUFB3O43676 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NDUFB3O43676 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.13■□□□□ 0.49
NDUFB3O43676 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
NDUFB3O43676 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms