Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SHOXO15266 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC18.52■□□□□ 0.56
SHOXO15266 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SHOXO15266 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.52■□□□□ 0.56
SHOXO15266 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SHOXO15266 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SHOXO15266 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SHOXO15266 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
SHOXO15266 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC18.52■□□□□ 0.56
SHOXO15266 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC18.52■□□□□ 0.56
SHOXO15266 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SHOXO15266 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SHOXO15266 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SHOXO15266 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SHOXO15266 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC18.52■□□□□ 0.55
SHOXO15266 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SHOXO15266 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SHOXO15266 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SHOXO15266 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.51■□□□□ 0.55
SHOXO15266 CD37-213ENST00000598095 1598 ntTSL 2 BASIC18.51■□□□□ 0.55
SHOXO15266 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.51■□□□□ 0.55
SHOXO15266 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SHOXO15266 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
SHOXO15266 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
SHOXO15266 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
SHOXO15266 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SHOXO15266 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
SHOXO15266 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SHOXO15266 IDNK-201ENST00000376417 511 ntTSL 5 BASIC18.51■□□□□ 0.55
SHOXO15266 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SHOXO15266 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SHOXO15266 AC012354.3-201ENST00000623734 483 ntBASIC18.51■□□□□ 0.55
SHOXO15266 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SHOXO15266 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SHOXO15266 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SHOXO15266 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
SHOXO15266 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.51■□□□□ 0.55
SHOXO15266 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SHOXO15266 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC18.51■□□□□ 0.55
SHOXO15266 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SHOXO15266 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
SHOXO15266 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SHOXO15266 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC18.5■□□□□ 0.55
SHOXO15266 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SHOXO15266 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SHOXO15266 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SHOXO15266 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
SHOXO15266 AC010980.1-201ENST00000587192 1142 ntBASIC18.5■□□□□ 0.55
SHOXO15266 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC18.5■□□□□ 0.55
SHOXO15266 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC18.5■□□□□ 0.55
SHOXO15266 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SHOXO15266 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.5■□□□□ 0.55
SHOXO15266 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.5■□□□□ 0.55
SHOXO15266 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SHOXO15266 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SHOXO15266 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SHOXO15266 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
SHOXO15266 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHOXO15266 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHOXO15266 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHOXO15266 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.49■□□□□ 0.55
SHOXO15266 GUK1-208ENST00000366728 842 ntTSL 2 BASIC18.49■□□□□ 0.55
SHOXO15266 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SHOXO15266 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC18.49■□□□□ 0.55
SHOXO15266 STK32C-205ENST00000456004 607 ntTSL 2 BASIC18.49■□□□□ 0.55
SHOXO15266 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC18.49■□□□□ 0.55
SHOXO15266 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHOXO15266 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.49■□□□□ 0.55
SHOXO15266 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.49■□□□□ 0.55
SHOXO15266 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHOXO15266 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
SHOXO15266 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHOXO15266 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SHOXO15266 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SHOXO15266 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SHOXO15266 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
SHOXO15266 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC18.48■□□□□ 0.55
SHOXO15266 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SHOXO15266 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.48■□□□□ 0.55
SHOXO15266 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
SHOXO15266 BEX3-202ENST00000372634 753 ntTSL 2 BASIC18.48■□□□□ 0.55
SHOXO15266 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC18.48■□□□□ 0.55
SHOXO15266 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SHOXO15266 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC18.48■□□□□ 0.55
SHOXO15266 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC18.48■□□□□ 0.55
SHOXO15266 AC120024.1-201ENST00000562672 995 ntBASIC18.48■□□□□ 0.55
SHOXO15266 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC18.48■□□□□ 0.55
SHOXO15266 THA1P-201ENST00000590384 1145 ntBASIC18.48■□□□□ 0.55
SHOXO15266 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SHOXO15266 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SHOXO15266 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SHOXO15266 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
SHOXO15266 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SHOXO15266 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
SHOXO15266 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SHOXO15266 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SHOXO15266 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SHOXO15266 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC18.47■□□□□ 0.55
SHOXO15266 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC18.47■□□□□ 0.55
SHOXO15266 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms