Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SMAD9O15198 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SMAD9O15198 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.72■□□□□ 0.75
SMAD9O15198 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SMAD9O15198 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMAD9O15198 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.72■□□□□ 0.75
SMAD9O15198 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.72■□□□□ 0.75
SMAD9O15198 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.72■□□□□ 0.75
SMAD9O15198 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
SMAD9O15198 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
SMAD9O15198 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMAD9O15198 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.71■□□□□ 0.75
SMAD9O15198 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SMAD9O15198 SLC47A1P1-202ENST00000449666 945 ntBASIC19.71■□□□□ 0.75
SMAD9O15198 AP001330.3-201ENST00000520123 633 ntBASIC19.71■□□□□ 0.75
SMAD9O15198 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SMAD9O15198 AL355001.2-201ENST00000620617 1191 ntBASIC19.71■□□□□ 0.75
SMAD9O15198 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SMAD9O15198 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SMAD9O15198 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.71■□□□□ 0.75
SMAD9O15198 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SMAD9O15198 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMAD9O15198 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SMAD9O15198 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMAD9O15198 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMAD9O15198 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMAD9O15198 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SMAD9O15198 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SMAD9O15198 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMAD9O15198 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMAD9O15198 AC010525.1-201ENST00000585559 441 ntBASIC19.7■□□□□ 0.74
SMAD9O15198 AC005837.3-201ENST00000612163 286 ntBASIC19.7■□□□□ 0.74
SMAD9O15198 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMAD9O15198 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
SMAD9O15198 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SMAD9O15198 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SMAD9O15198 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
SMAD9O15198 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.69■□□□□ 0.74
SMAD9O15198 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMAD9O15198 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
SMAD9O15198 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SMAD9O15198 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
SMAD9O15198 BX842568.3-201ENST00000418104 571 ntBASIC19.69■□□□□ 0.74
SMAD9O15198 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.69■□□□□ 0.74
SMAD9O15198 SUDS3P1-201ENST00000505831 966 ntBASIC19.69■□□□□ 0.74
SMAD9O15198 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SMAD9O15198 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.69■□□□□ 0.74
SMAD9O15198 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMAD9O15198 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMAD9O15198 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMAD9O15198 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.69■□□□□ 0.74
SMAD9O15198 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
SMAD9O15198 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMAD9O15198 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMAD9O15198 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMAD9O15198 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.69■□□□□ 0.74
SMAD9O15198 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMAD9O15198 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
SMAD9O15198 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMAD9O15198 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SMAD9O15198 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.68■□□□□ 0.74
SMAD9O15198 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.68■□□□□ 0.74
SMAD9O15198 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMAD9O15198 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.68■□□□□ 0.74
SMAD9O15198 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.68■□□□□ 0.74
SMAD9O15198 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
SMAD9O15198 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SMAD9O15198 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMAD9O15198 MIR939-201ENST00000401314 82 ntBASIC19.68■□□□□ 0.74
SMAD9O15198 AF213884.3-201ENST00000563833 479 ntBASIC19.68■□□□□ 0.74
SMAD9O15198 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
SMAD9O15198 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SMAD9O15198 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.68■□□□□ 0.74
SMAD9O15198 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
SMAD9O15198 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SMAD9O15198 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMAD9O15198 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SMAD9O15198 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMAD9O15198 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
SMAD9O15198 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SMAD9O15198 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMAD9O15198 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.67■□□□□ 0.74
SMAD9O15198 AC008764.7-201ENST00000593779 1081 ntBASIC19.67■□□□□ 0.74
SMAD9O15198 AC233992.3-201ENST00000607491 485 ntBASIC19.67■□□□□ 0.74
SMAD9O15198 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.67■□□□□ 0.74
SMAD9O15198 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
SMAD9O15198 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SMAD9O15198 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.66■□□□□ 0.74
SMAD9O15198 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMAD9O15198 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.66■□□□□ 0.74
SMAD9O15198 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMAD9O15198 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SMAD9O15198 AC027682.1-201ENST00000562846 899 ntBASIC19.66■□□□□ 0.74
SMAD9O15198 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.66■□□□□ 0.74
SMAD9O15198 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SMAD9O15198 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMAD9O15198 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
SMAD9O15198 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMAD9O15198 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
SMAD9O15198 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 631.3 ms