Protein–RNA interactions for Protein: O14874

BCKDK, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDKO14874 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
BCKDKO14874 C11orf96-202ENST00000528572 1834 ntBASIC20.62■□□□□ 0.89
BCKDKO14874 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.62■□□□□ 0.89
BCKDKO14874 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
BCKDKO14874 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BCKDKO14874 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
BCKDKO14874 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BCKDKO14874 PBX2P1-201ENST00000493219 1291 ntBASIC20.61■□□□□ 0.89
BCKDKO14874 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
BCKDKO14874 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BCKDKO14874 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.61■□□□□ 0.89
BCKDKO14874 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
BCKDKO14874 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BCKDKO14874 AC092053.2-201ENST00000640557 1818 ntBASIC20.6■□□□□ 0.89
BCKDKO14874 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BCKDKO14874 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.6■□□□□ 0.89
BCKDKO14874 UNC93B3-201ENST00000308076 687 ntBASIC20.6■□□□□ 0.89
BCKDKO14874 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
BCKDKO14874 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BCKDKO14874 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.6■□□□□ 0.89
BCKDKO14874 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.6■□□□□ 0.89
BCKDKO14874 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.6■□□□□ 0.89
BCKDKO14874 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.6■□□□□ 0.89
BCKDKO14874 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BCKDKO14874 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
BCKDKO14874 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BCKDKO14874 AC139530.1-201ENST00000575312 1977 ntBASIC20.59■□□□□ 0.89
BCKDKO14874 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BCKDKO14874 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BCKDKO14874 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.59■□□□□ 0.89
BCKDKO14874 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
BCKDKO14874 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
BCKDKO14874 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BCKDKO14874 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BCKDKO14874 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BCKDKO14874 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BCKDKO14874 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.59■□□□□ 0.89
BCKDKO14874 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
BCKDKO14874 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
BCKDKO14874 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
BCKDKO14874 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
BCKDKO14874 DUX4L19-201ENST00000557448 1267 ntBASIC20.59■□□□□ 0.89
BCKDKO14874 AC092171.4-201ENST00000609130 632 ntBASIC20.59■□□□□ 0.89
BCKDKO14874 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
BCKDKO14874 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
BCKDKO14874 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
BCKDKO14874 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
BCKDKO14874 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.59■□□□□ 0.89
BCKDKO14874 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
BCKDKO14874 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
BCKDKO14874 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
BCKDKO14874 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
BCKDKO14874 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
BCKDKO14874 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
BCKDKO14874 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
BCKDKO14874 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
BCKDKO14874 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.58■□□□□ 0.89
BCKDKO14874 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
BCKDKO14874 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
BCKDKO14874 AL136162.1-201ENST00000607711 1078 ntBASIC20.58■□□□□ 0.89
BCKDKO14874 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.58■□□□□ 0.89
BCKDKO14874 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
BCKDKO14874 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
BCKDKO14874 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
BCKDKO14874 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.58■□□□□ 0.88
BCKDKO14874 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
BCKDKO14874 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
BCKDKO14874 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BCKDKO14874 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
BCKDKO14874 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
BCKDKO14874 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
BCKDKO14874 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BCKDKO14874 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
BCKDKO14874 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.56■□□□□ 0.88
BCKDKO14874 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.56■□□□□ 0.88
BCKDKO14874 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
BCKDKO14874 AC135279.3-201ENST00000610945 1311 ntBASIC20.56■□□□□ 0.88
BCKDKO14874 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BCKDKO14874 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.56■□□□□ 0.88
BCKDKO14874 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BCKDKO14874 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.56■□□□□ 0.88
BCKDKO14874 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.56■□□□□ 0.88
BCKDKO14874 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
BCKDKO14874 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.56■□□□□ 0.88
BCKDKO14874 ALDH1A3-203ENST00000557963 1670 ntBASIC20.56■□□□□ 0.88
BCKDKO14874 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.56■□□□□ 0.88
BCKDKO14874 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
BCKDKO14874 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.55■□□□□ 0.88
BCKDKO14874 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.55■□□□□ 0.88
BCKDKO14874 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
BCKDKO14874 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
BCKDKO14874 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BCKDKO14874 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.55■□□□□ 0.88
BCKDKO14874 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.55■□□□□ 0.88
BCKDKO14874 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
BCKDKO14874 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
BCKDKO14874 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.55■□□□□ 0.88
BCKDKO14874 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
BCKDKO14874 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
BCKDKO14874 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms