Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.72■□□□□ 0.91
UPK1AO00322 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
UPK1AO00322 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.72■□□□□ 0.91
UPK1AO00322 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
UPK1AO00322 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
UPK1AO00322 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
UPK1AO00322 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
UPK1AO00322 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
UPK1AO00322 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.72■□□□□ 0.91
UPK1AO00322 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.71■□□□□ 0.91
UPK1AO00322 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.71■□□□□ 0.91
UPK1AO00322 AC026310.3-201ENST00000625186 2373 ntBASIC20.71■□□□□ 0.91
UPK1AO00322 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
UPK1AO00322 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
UPK1AO00322 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.71■□□□□ 0.91
UPK1AO00322 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.71■□□□□ 0.91
UPK1AO00322 AL512631.2-201ENST00000604634 923 ntBASIC20.71■□□□□ 0.91
UPK1AO00322 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.71■□□□□ 0.91
UPK1AO00322 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.71■□□□□ 0.91
UPK1AO00322 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
UPK1AO00322 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
UPK1AO00322 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
UPK1AO00322 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
UPK1AO00322 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UPK1AO00322 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UPK1AO00322 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.7■□□□□ 0.9
UPK1AO00322 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
UPK1AO00322 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.7■□□□□ 0.9
UPK1AO00322 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.7■□□□□ 0.9
UPK1AO00322 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.7■□□□□ 0.9
UPK1AO00322 AC009086.3-201ENST00000623486 1008 ntBASIC20.7■□□□□ 0.9
UPK1AO00322 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
UPK1AO00322 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
UPK1AO00322 AC087742.1-201ENST00000575880 1738 ntBASIC20.7■□□□□ 0.9
UPK1AO00322 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.69■□□□□ 0.9
UPK1AO00322 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
UPK1AO00322 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
UPK1AO00322 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.69■□□□□ 0.9
UPK1AO00322 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.69■□□□□ 0.9
UPK1AO00322 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
UPK1AO00322 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.69■□□□□ 0.9
UPK1AO00322 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
UPK1AO00322 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UPK1AO00322 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.69■□□□□ 0.9
UPK1AO00322 AC241377.3-202ENST00000626088 1088 ntBASIC20.69■□□□□ 0.9
UPK1AO00322 AC241585.3-202ENST00000628937 1088 ntBASIC20.69■□□□□ 0.9
UPK1AO00322 AC245100.8-202ENST00000629247 1058 ntBASIC20.69■□□□□ 0.9
UPK1AO00322 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
UPK1AO00322 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UPK1AO00322 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UPK1AO00322 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UPK1AO00322 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UPK1AO00322 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
UPK1AO00322 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
UPK1AO00322 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
UPK1AO00322 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UPK1AO00322 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.68■□□□□ 0.9
UPK1AO00322 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.68■□□□□ 0.9
UPK1AO00322 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
UPK1AO00322 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UPK1AO00322 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.68■□□□□ 0.9
UPK1AO00322 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.68■□□□□ 0.9
UPK1AO00322 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.68■□□□□ 0.9
UPK1AO00322 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.68■□□□□ 0.9
UPK1AO00322 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.68■□□□□ 0.9
UPK1AO00322 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.68■□□□□ 0.9
UPK1AO00322 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
UPK1AO00322 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
UPK1AO00322 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
UPK1AO00322 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UPK1AO00322 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.67■□□□□ 0.9
UPK1AO00322 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UPK1AO00322 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
UPK1AO00322 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
UPK1AO00322 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.67■□□□□ 0.9
UPK1AO00322 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UPK1AO00322 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UPK1AO00322 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UPK1AO00322 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UPK1AO00322 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UPK1AO00322 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UPK1AO00322 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.66■□□□□ 0.9
UPK1AO00322 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UPK1AO00322 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
UPK1AO00322 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.66■□□□□ 0.9
UPK1AO00322 AC099791.2-201ENST00000605725 427 ntBASIC20.66■□□□□ 0.9
UPK1AO00322 AL499627.2-201ENST00000606283 725 ntBASIC20.66■□□□□ 0.9
UPK1AO00322 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
UPK1AO00322 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.66■□□□□ 0.9
UPK1AO00322 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
UPK1AO00322 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.66■□□□□ 0.9
UPK1AO00322 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.66■□□□□ 0.9
UPK1AO00322 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UPK1AO00322 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UPK1AO00322 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
UPK1AO00322 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
UPK1AO00322 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.66■□□□□ 0.9
UPK1AO00322 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
UPK1AO00322 SLC25A24-204ENST00000569674 2357 ntBASIC20.65■□□□□ 0.9
UPK1AO00322 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms