Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
TNFRSF11BO00300 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.16■□□□□ 0.82
TNFRSF11BO00300 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.16■□□□□ 0.82
TNFRSF11BO00300 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TNFRSF11BO00300 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TNFRSF11BO00300 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TNFRSF11BO00300 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.15■□□□□ 0.82
TNFRSF11BO00300 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TNFRSF11BO00300 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
TNFRSF11BO00300 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TNFRSF11BO00300 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.15■□□□□ 0.82
TNFRSF11BO00300 DUX4L4-201ENST00000566884 1269 ntBASIC20.15■□□□□ 0.82
TNFRSF11BO00300 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.15■□□□□ 0.82
TNFRSF11BO00300 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.15■□□□□ 0.82
TNFRSF11BO00300 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TNFRSF11BO00300 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TNFRSF11BO00300 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
TNFRSF11BO00300 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TNFRSF11BO00300 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TNFRSF11BO00300 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TNFRSF11BO00300 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TNFRSF11BO00300 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TNFRSF11BO00300 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.14■□□□□ 0.81
TNFRSF11BO00300 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.14■□□□□ 0.81
TNFRSF11BO00300 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TNFRSF11BO00300 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.14■□□□□ 0.81
TNFRSF11BO00300 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TNFRSF11BO00300 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TNFRSF11BO00300 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TNFRSF11BO00300 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.13■□□□□ 0.81
TNFRSF11BO00300 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TNFRSF11BO00300 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
TNFRSF11BO00300 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
TNFRSF11BO00300 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TNFRSF11BO00300 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TNFRSF11BO00300 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
TNFRSF11BO00300 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
TNFRSF11BO00300 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TNFRSF11BO00300 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
TNFRSF11BO00300 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TNFRSF11BO00300 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.13■□□□□ 0.81
TNFRSF11BO00300 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
TNFRSF11BO00300 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TNFRSF11BO00300 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TNFRSF11BO00300 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TNFRSF11BO00300 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.12■□□□□ 0.81
TNFRSF11BO00300 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
TNFRSF11BO00300 AC137630.3-201ENST00000607245 391 ntBASIC20.12■□□□□ 0.81
TNFRSF11BO00300 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.12■□□□□ 0.81
TNFRSF11BO00300 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.12■□□□□ 0.81
TNFRSF11BO00300 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TNFRSF11BO00300 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.12■□□□□ 0.81
TNFRSF11BO00300 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.12■□□□□ 0.81
TNFRSF11BO00300 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TNFRSF11BO00300 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TNFRSF11BO00300 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
TNFRSF11BO00300 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.11■□□□□ 0.81
TNFRSF11BO00300 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TNFRSF11BO00300 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
TNFRSF11BO00300 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.11■□□□□ 0.81
TNFRSF11BO00300 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TNFRSF11BO00300 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TNFRSF11BO00300 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.11■□□□□ 0.81
TNFRSF11BO00300 MIR6722-201ENST00000617286 78 ntBASIC20.11■□□□□ 0.81
TNFRSF11BO00300 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
TNFRSF11BO00300 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
TNFRSF11BO00300 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TNFRSF11BO00300 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TNFRSF11BO00300 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
TNFRSF11BO00300 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TNFRSF11BO00300 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TNFRSF11BO00300 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TNFRSF11BO00300 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TNFRSF11BO00300 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TNFRSF11BO00300 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TNFRSF11BO00300 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
TNFRSF11BO00300 AC005229.4-201ENST00000610085 2198 ntBASIC20.1■□□□□ 0.81
TNFRSF11BO00300 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TNFRSF11BO00300 AC244015.2-201ENST00000616358 1861 ntBASIC20.1■□□□□ 0.81
TNFRSF11BO00300 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.1■□□□□ 0.81
TNFRSF11BO00300 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.1■□□□□ 0.81
TNFRSF11BO00300 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TNFRSF11BO00300 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.1■□□□□ 0.81
TNFRSF11BO00300 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TNFRSF11BO00300 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TNFRSF11BO00300 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
TNFRSF11BO00300 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.1■□□□□ 0.81
TNFRSF11BO00300 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TNFRSF11BO00300 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TNFRSF11BO00300 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TNFRSF11BO00300 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.1■□□□□ 0.81
TNFRSF11BO00300 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TNFRSF11BO00300 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TNFRSF11BO00300 AC004687.1-201ENST00000579003 1625 ntBASIC20.09■□□□□ 0.81
TNFRSF11BO00300 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
TNFRSF11BO00300 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TNFRSF11BO00300 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.09■□□□□ 0.81
TNFRSF11BO00300 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TNFRSF11BO00300 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TNFRSF11BO00300 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms