Protein–RNA interactions for Protein: A8K7I4

CLCA1, Calcium-activated chloride channel regulator 1, humanhuman

Predictions only

Length 914 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA1A8K7I4 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.32■□□□□ 0.84
CLCA1A8K7I4 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLCA1A8K7I4 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLCA1A8K7I4 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.32■□□□□ 0.84
CLCA1A8K7I4 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.32■□□□□ 0.84
CLCA1A8K7I4 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.32■□□□□ 0.84
CLCA1A8K7I4 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLCA1A8K7I4 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLCA1A8K7I4 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.31■□□□□ 0.84
CLCA1A8K7I4 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CLCA1A8K7I4 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLCA1A8K7I4 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CLCA1A8K7I4 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CLCA1A8K7I4 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CLCA1A8K7I4 AC005837.3-201ENST00000612163 286 ntBASIC20.31■□□□□ 0.84
CLCA1A8K7I4 AC139530.1-201ENST00000575312 1977 ntBASIC20.31■□□□□ 0.84
CLCA1A8K7I4 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CLCA1A8K7I4 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.31■□□□□ 0.84
CLCA1A8K7I4 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLCA1A8K7I4 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLCA1A8K7I4 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLCA1A8K7I4 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLCA1A8K7I4 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CLCA1A8K7I4 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLCA1A8K7I4 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CLCA1A8K7I4 UNC93B3-201ENST00000308076 687 ntBASIC20.3■□□□□ 0.84
CLCA1A8K7I4 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLCA1A8K7I4 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CLCA1A8K7I4 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLCA1A8K7I4 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLCA1A8K7I4 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLCA1A8K7I4 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CLCA1A8K7I4 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLCA1A8K7I4 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLCA1A8K7I4 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLCA1A8K7I4 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLCA1A8K7I4 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CLCA1A8K7I4 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CLCA1A8K7I4 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CLCA1A8K7I4 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLCA1A8K7I4 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.29■□□□□ 0.84
CLCA1A8K7I4 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CLCA1A8K7I4 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLCA1A8K7I4 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLCA1A8K7I4 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLCA1A8K7I4 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.29■□□□□ 0.84
CLCA1A8K7I4 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLCA1A8K7I4 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLCA1A8K7I4 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CLCA1A8K7I4 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLCA1A8K7I4 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CLCA1A8K7I4 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CLCA1A8K7I4 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLCA1A8K7I4 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLCA1A8K7I4 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.28■□□□□ 0.84
CLCA1A8K7I4 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLCA1A8K7I4 PBX2P1-201ENST00000493219 1291 ntBASIC20.28■□□□□ 0.84
CLCA1A8K7I4 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.28■□□□□ 0.84
CLCA1A8K7I4 PKD1P6-201ENST00000343738 4769 ntBASIC20.28■□□□□ 0.84
CLCA1A8K7I4 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.28■□□□□ 0.84
CLCA1A8K7I4 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.28■□□□□ 0.84
CLCA1A8K7I4 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CLCA1A8K7I4 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLCA1A8K7I4 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.28■□□□□ 0.84
CLCA1A8K7I4 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.28■□□□□ 0.84
CLCA1A8K7I4 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.27■□□□□ 0.84
CLCA1A8K7I4 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLCA1A8K7I4 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.27■□□□□ 0.84
CLCA1A8K7I4 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.27■□□□□ 0.84
CLCA1A8K7I4 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLCA1A8K7I4 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
CLCA1A8K7I4 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CLCA1A8K7I4 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CLCA1A8K7I4 AL136162.1-201ENST00000607711 1078 ntBASIC20.27■□□□□ 0.84
CLCA1A8K7I4 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.27■□□□□ 0.84
CLCA1A8K7I4 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.27■□□□□ 0.84
CLCA1A8K7I4 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.27■□□□□ 0.83
CLCA1A8K7I4 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CLCA1A8K7I4 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.26■□□□□ 0.83
CLCA1A8K7I4 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLCA1A8K7I4 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.26■□□□□ 0.83
CLCA1A8K7I4 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.26■□□□□ 0.83
CLCA1A8K7I4 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLCA1A8K7I4 AC133561.4-201ENST00000566112 224 ntBASIC20.26■□□□□ 0.83
CLCA1A8K7I4 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.26■□□□□ 0.83
CLCA1A8K7I4 AC092171.4-201ENST00000609130 632 ntBASIC20.26■□□□□ 0.83
CLCA1A8K7I4 AC106739.1-201ENST00000617035 715 ntBASIC20.26■□□□□ 0.83
CLCA1A8K7I4 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CLCA1A8K7I4 C17orf82-201ENST00000623772 1530 ntBASIC20.26■□□□□ 0.83
CLCA1A8K7I4 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.26■□□□□ 0.83
CLCA1A8K7I4 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.26■□□□□ 0.83
CLCA1A8K7I4 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLCA1A8K7I4 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CLCA1A8K7I4 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
CLCA1A8K7I4 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLCA1A8K7I4 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.25■□□□□ 0.83
CLCA1A8K7I4 DUX4L19-201ENST00000557448 1267 ntBASIC20.25■□□□□ 0.83
CLCA1A8K7I4 AC099791.2-201ENST00000605725 427 ntBASIC20.25■□□□□ 0.83
CLCA1A8K7I4 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.25■□□□□ 0.83
CLCA1A8K7I4 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms