Protein–RNA interactions for Protein: A6NCS4

NKX2-6, Homeobox protein Nkx-2.6, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-6A6NCS4 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.42■□□□□ 0.7
NKX2-6A6NCS4 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.42■□□□□ 0.7
NKX2-6A6NCS4 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.42■□□□□ 0.7
NKX2-6A6NCS4 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.42■□□□□ 0.7
NKX2-6A6NCS4 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NKX2-6A6NCS4 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
NKX2-6A6NCS4 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.42■□□□□ 0.7
NKX2-6A6NCS4 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NKX2-6A6NCS4 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NKX2-6A6NCS4 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
NKX2-6A6NCS4 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NKX2-6A6NCS4 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NKX2-6A6NCS4 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.42■□□□□ 0.7
NKX2-6A6NCS4 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NKX2-6A6NCS4 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NKX2-6A6NCS4 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NKX2-6A6NCS4 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NKX2-6A6NCS4 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NKX2-6A6NCS4 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
NKX2-6A6NCS4 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.41■□□□□ 0.7
NKX2-6A6NCS4 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NKX2-6A6NCS4 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
NKX2-6A6NCS4 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NKX2-6A6NCS4 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.41■□□□□ 0.7
NKX2-6A6NCS4 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NKX2-6A6NCS4 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.41■□□□□ 0.7
NKX2-6A6NCS4 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.41■□□□□ 0.7
NKX2-6A6NCS4 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.41■□□□□ 0.7
NKX2-6A6NCS4 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.41■□□□□ 0.7
NKX2-6A6NCS4 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NKX2-6A6NCS4 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.41■□□□□ 0.7
NKX2-6A6NCS4 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
NKX2-6A6NCS4 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
NKX2-6A6NCS4 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
NKX2-6A6NCS4 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
NKX2-6A6NCS4 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NKX2-6A6NCS4 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
NKX2-6A6NCS4 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
NKX2-6A6NCS4 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NKX2-6A6NCS4 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.4■□□□□ 0.7
NKX2-6A6NCS4 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
NKX2-6A6NCS4 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
NKX2-6A6NCS4 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.4■□□□□ 0.7
NKX2-6A6NCS4 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.4■□□□□ 0.7
NKX2-6A6NCS4 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.4■□□□□ 0.7
NKX2-6A6NCS4 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NKX2-6A6NCS4 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NKX2-6A6NCS4 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NKX2-6A6NCS4 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
NKX2-6A6NCS4 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
NKX2-6A6NCS4 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.39■□□□□ 0.69
NKX2-6A6NCS4 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.39■□□□□ 0.69
NKX2-6A6NCS4 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NKX2-6A6NCS4 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NKX2-6A6NCS4 AC006015.1-201ENST00000429970 570 ntBASIC19.39■□□□□ 0.69
NKX2-6A6NCS4 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.39■□□□□ 0.69
NKX2-6A6NCS4 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NKX2-6A6NCS4 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
NKX2-6A6NCS4 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NKX2-6A6NCS4 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.38■□□□□ 0.69
NKX2-6A6NCS4 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
NKX2-6A6NCS4 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NKX2-6A6NCS4 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NKX2-6A6NCS4 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
NKX2-6A6NCS4 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
NKX2-6A6NCS4 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NKX2-6A6NCS4 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NKX2-6A6NCS4 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NKX2-6A6NCS4 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.38■□□□□ 0.69
NKX2-6A6NCS4 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.38■□□□□ 0.69
NKX2-6A6NCS4 TPRG1LP1-201ENST00000598702 760 ntBASIC19.38■□□□□ 0.69
NKX2-6A6NCS4 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
NKX2-6A6NCS4 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.38■□□□□ 0.69
NKX2-6A6NCS4 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.38■□□□□ 0.69
NKX2-6A6NCS4 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NKX2-6A6NCS4 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NKX2-6A6NCS4 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NKX2-6A6NCS4 AC004687.1-201ENST00000579003 1625 ntBASIC19.37■□□□□ 0.69
NKX2-6A6NCS4 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.37■□□□□ 0.69
NKX2-6A6NCS4 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.37■□□□□ 0.69
NKX2-6A6NCS4 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NKX2-6A6NCS4 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NKX2-6A6NCS4 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.37■□□□□ 0.69
NKX2-6A6NCS4 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.37■□□□□ 0.69
NKX2-6A6NCS4 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.37■□□□□ 0.69
NKX2-6A6NCS4 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
NKX2-6A6NCS4 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
NKX2-6A6NCS4 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NKX2-6A6NCS4 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
NKX2-6A6NCS4 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
NKX2-6A6NCS4 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.37■□□□□ 0.69
NKX2-6A6NCS4 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NKX2-6A6NCS4 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NKX2-6A6NCS4 AC004854.2-201ENST00000608450 1441 ntBASIC19.36■□□□□ 0.69
NKX2-6A6NCS4 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
NKX2-6A6NCS4 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NKX2-6A6NCS4 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NKX2-6A6NCS4 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NKX2-6A6NCS4 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.36■□□□□ 0.69
NKX2-6A6NCS4 AC073111.5-205ENST00000641717 521 ntBASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms