Protein–RNA interactions for Protein: A0A075B6T7

TRAV6, T-cell receptor alpha variable 6 (Fragment), humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV6A0A075B6T7 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV6A0A075B6T7 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.67■□□□□ 0.58
TRAV6A0A075B6T7 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV6A0A075B6T7 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV6A0A075B6T7 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV6A0A075B6T7 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV6A0A075B6T7 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV6A0A075B6T7 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV6A0A075B6T7 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.66■□□□□ 0.58
TRAV6A0A075B6T7 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV6A0A075B6T7 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC18.66■□□□□ 0.58
TRAV6A0A075B6T7 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV6A0A075B6T7 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV6A0A075B6T7 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV6A0A075B6T7 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV6A0A075B6T7 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
TRAV6A0A075B6T7 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV6A0A075B6T7 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV6A0A075B6T7 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV6A0A075B6T7 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV6A0A075B6T7 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV6A0A075B6T7 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV6A0A075B6T7 RP9P-202ENST00000450133 1212 ntBASIC18.65■□□□□ 0.58
TRAV6A0A075B6T7 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV6A0A075B6T7 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.65■□□□□ 0.58
TRAV6A0A075B6T7 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
TRAV6A0A075B6T7 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV6A0A075B6T7 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV6A0A075B6T7 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV6A0A075B6T7 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV6A0A075B6T7 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.65■□□□□ 0.58
TRAV6A0A075B6T7 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TRAV6A0A075B6T7 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV6A0A075B6T7 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
TRAV6A0A075B6T7 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
TRAV6A0A075B6T7 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
TRAV6A0A075B6T7 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.64■□□□□ 0.58
TRAV6A0A075B6T7 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV6A0A075B6T7 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV6A0A075B6T7 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV6A0A075B6T7 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC18.64■□□□□ 0.57
TRAV6A0A075B6T7 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV6A0A075B6T7 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
TRAV6A0A075B6T7 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV6A0A075B6T7 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
TRAV6A0A075B6T7 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.64■□□□□ 0.57
TRAV6A0A075B6T7 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV6A0A075B6T7 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV6A0A075B6T7 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV6A0A075B6T7 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.63■□□□□ 0.57
TRAV6A0A075B6T7 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV6A0A075B6T7 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV6A0A075B6T7 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV6A0A075B6T7 AC093536.1-201ENST00000569153 554 ntBASIC18.63■□□□□ 0.57
TRAV6A0A075B6T7 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV6A0A075B6T7 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV6A0A075B6T7 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TRAV6A0A075B6T7 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV6A0A075B6T7 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC18.63■□□□□ 0.57
TRAV6A0A075B6T7 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV6A0A075B6T7 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV6A0A075B6T7 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV6A0A075B6T7 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV6A0A075B6T7 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV6A0A075B6T7 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.62■□□□□ 0.57
TRAV6A0A075B6T7 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.62■□□□□ 0.57
TRAV6A0A075B6T7 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV6A0A075B6T7 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV6A0A075B6T7 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.62■□□□□ 0.57
TRAV6A0A075B6T7 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
TRAV6A0A075B6T7 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV6A0A075B6T7 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV6A0A075B6T7 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV6A0A075B6T7 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV6A0A075B6T7 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
TRAV6A0A075B6T7 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.62■□□□□ 0.57
TRAV6A0A075B6T7 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.62■□□□□ 0.57
TRAV6A0A075B6T7 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV6A0A075B6T7 LINC01006-201ENST00000333319 2292 ntBASIC18.62■□□□□ 0.57
TRAV6A0A075B6T7 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV6A0A075B6T7 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV6A0A075B6T7 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.61■□□□□ 0.57
TRAV6A0A075B6T7 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV6A0A075B6T7 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV6A0A075B6T7 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.61■□□□□ 0.57
TRAV6A0A075B6T7 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV6A0A075B6T7 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC18.61■□□□□ 0.57
TRAV6A0A075B6T7 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC18.61■□□□□ 0.57
TRAV6A0A075B6T7 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC18.61■□□□□ 0.57
TRAV6A0A075B6T7 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
TRAV6A0A075B6T7 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV6A0A075B6T7 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV6A0A075B6T7 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.6■□□□□ 0.57
TRAV6A0A075B6T7 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV6A0A075B6T7 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV6A0A075B6T7 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV6A0A075B6T7 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC18.6■□□□□ 0.57
TRAV6A0A075B6T7 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC18.6■□□□□ 0.57
TRAV6A0A075B6T7 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
TRAV6A0A075B6T7 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms