Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SCN2BO60939 CYP4F12-215ENST00000550308 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SCN2BO60939 ERVK13-1-205ENST00000568395 5578 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SCN2BO60939 SMCR5-201ENST00000543475 2844 ntBASIC12.08□□□□□ -0.48
SCN2BO60939 TXNRD1-202ENST00000388854 4277 ntTSL 5 BASIC12.08□□□□□ -0.48
SCN2BO60939 DCAF11-204ENST00000446197 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SCN2BO60939 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC12.08□□□□□ -0.48
SCN2BO60939 LRRC8A-201ENST00000259324 4619 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
SCN2BO60939 GZMB-201ENST00000216341 968 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SCN2BO60939 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SCN2BO60939 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
SCN2BO60939 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SCN2BO60939 RNA5SP84-201ENST00000364740 107 ntBASIC12.08□□□□□ -0.48
SCN2BO60939 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SCN2BO60939 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SCN2BO60939 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SCN2BO60939 MYH9-202ENST00000401701 789 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SCN2BO60939 STK16-203ENST00000409516 895 ntTSL 2 BASIC12.08□□□□□ -0.48
SCN2BO60939 ZNF589-202ENST00000412564 593 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SCN2BO60939 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC12.08□□□□□ -0.48
SCN2BO60939 AC006059.1-201ENST00000438017 722 ntTSL 5 BASIC12.08□□□□□ -0.48
SCN2BO60939 AC104623.1-201ENST00000446357 546 ntTSL 4 BASIC12.08□□□□□ -0.48
SCN2BO60939 RN7SL582P-201ENST00000491078 279 ntBASIC12.08□□□□□ -0.48
SCN2BO60939 HNRNPA1P55-201ENST00000505935 955 ntBASIC12.08□□□□□ -0.48
SCN2BO60939 AC084752.1-201ENST00000509766 622 ntBASIC12.08□□□□□ -0.48
SCN2BO60939 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC12.08□□□□□ -0.48
SCN2BO60939 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SCN2BO60939 AC073610.2-201ENST00000537495 406 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
SCN2BO60939 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC12.08□□□□□ -0.48
SCN2BO60939 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC12.08□□□□□ -0.48
SCN2BO60939 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC12.08□□□□□ -0.48
SCN2BO60939 CYP4F36P-201ENST00000589193 186 ntBASIC12.08□□□□□ -0.48
SCN2BO60939 FXYD3-212ENST00000605550 590 ntTSL 4 BASIC12.08□□□□□ -0.48
SCN2BO60939 AC006483.2-201ENST00000609813 515 ntBASIC12.08□□□□□ -0.48
SCN2BO60939 URAHP-205ENST00000610227 398 ntBASIC12.08□□□□□ -0.48
SCN2BO60939 AC007450.4-201ENST00000614709 524 ntBASIC12.08□□□□□ -0.48
SCN2BO60939 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SCN2BO60939 RARS-210ENST00000626454 177 ntTSL 5 BASIC12.08□□□□□ -0.48
SCN2BO60939 RTFDC1-202ENST00000357348 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SCN2BO60939 SMIM21-202ENST00000579022 1834 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
SCN2BO60939 TP53TG3F-201ENST00000617705 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SCN2BO60939 EEF1AKMT3-202ENST00000333012 2762 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SCN2BO60939 FLT4-202ENST00000393347 4292 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SCN2BO60939 SMG8-202ENST00000543872 3477 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
SCN2BO60939 SEPT10-202ENST00000397712 3071 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SCN2BO60939 OSER1-AS1-202ENST00000437730 1563 ntTSL 5 BASIC12.08□□□□□ -0.48
SCN2BO60939 AC026725.1-201ENST00000511327 1588 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SCN2BO60939 FBXO34-202ENST00000440021 2831 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
SCN2BO60939 POTEB-202ENST00000439682 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SCN2BO60939 ZNF384-203ENST00000361959 2978 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
SCN2BO60939 Z97192.3-201ENST00000420902 2975 ntTSL 2 BASIC12.08□□□□□ -0.48
SCN2BO60939 SLC25A25-205ENST00000432073 3678 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SCN2BO60939 FHOD1-201ENST00000258201 3990 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SCN2BO60939 FUT10-211ENST00000524021 2042 ntTSL 2 BASIC12.08□□□□□ -0.48
SCN2BO60939 NDRG4-203ENST00000394279 3431 ntTSL 5 BASIC12.08□□□□□ -0.48
SCN2BO60939 OLFML2A-201ENST00000288815 5964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SCN2BO60939 MADD-201ENST00000311027 5990 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
SCN2BO60939 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SCN2BO60939 NNMT-201ENST00000299964 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SCN2BO60939 AP000897.1-201ENST00000584036 1613 ntBASIC12.08□□□□□ -0.48
SCN2BO60939 NAB1-203ENST00000409641 2472 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SCN2BO60939 ZKSCAN5-202ENST00000394170 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SCN2BO60939 CELF4-218ENST00000591287 3757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SCN2BO60939 LINC00442-202ENST00000456737 2063 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SCN2BO60939 LIMK1-201ENST00000336180 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SCN2BO60939 DHODH-205ENST00000572887 4824 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
SCN2BO60939 ST5-230ENST00000530438 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SCN2BO60939 HLF-202ENST00000430986 1385 ntTSL 2 BASIC12.07□□□□□ -0.48
SCN2BO60939 FAM95B1-211ENST00000592053 1541 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SCN2BO60939 AL669942.1-203ENST00000610972 1541 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SCN2BO60939 PAX9-202ENST00000402703 3104 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
SCN2BO60939 SPTY2D1-201ENST00000336349 5754 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SCN2BO60939 LRRC2-201ENST00000296144 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SCN2BO60939 EME1-207ENST00000511648 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SCN2BO60939 GGPS1-202ENST00000358966 2740 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
SCN2BO60939 FOXO4-202ENST00000374259 3301 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SCN2BO60939 SNX14-201ENST00000314673 3486 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
SCN2BO60939 ETNK1-201ENST00000266517 7159 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SCN2BO60939 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SCN2BO60939 PTPRG-201ENST00000295874 4650 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SCN2BO60939 HSPA12A-201ENST00000369209 5722 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
SCN2BO60939 PLEKHG3-201ENST00000247226 10351 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SCN2BO60939 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SCN2BO60939 CA2-201ENST00000285379 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SCN2BO60939 RNF213-201ENST00000319921 5316 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SCN2BO60939 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
SCN2BO60939 BCL2L11-203ENST00000357757 947 ntTSL 5 BASIC12.07□□□□□ -0.48
SCN2BO60939 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SCN2BO60939 CCL19-202ENST00000378800 414 ntTSL 2 BASIC12.07□□□□□ -0.48
SCN2BO60939 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
SCN2BO60939 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC12.07□□□□□ -0.48
SCN2BO60939 AC004522.1-201ENST00000419978 654 ntBASIC12.07□□□□□ -0.48
SCN2BO60939 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
SCN2BO60939 HNRNPA3P12-201ENST00000437410 1063 ntBASIC12.07□□□□□ -0.48
SCN2BO60939 IGFL1-201ENST00000437936 769 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SCN2BO60939 RPSAP69-201ENST00000445739 546 ntTSL 4 BASIC12.07□□□□□ -0.48
SCN2BO60939 UBP1-204ENST00000447368 3669 ntAPPRIS ALT1 TSL 2 BASIC12.07□□□□□ -0.48
SCN2BO60939 AC006372.1-201ENST00000449903 546 ntTSL 2 BASIC12.07□□□□□ -0.48
SCN2BO60939 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC12.07□□□□□ -0.48
SCN2BO60939 AC113340.1-201ENST00000475257 636 ntBASIC12.07□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms