Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 AC011458.2-201ENST00000603937 207 ntBASIC10.43□□□□□ -0.74
RAB40CQ96S21 AL137028.1-201ENST00000620521 555 ntBASIC10.43□□□□□ -0.74
RAB40CQ96S21 MAGED2-205ENST00000375060 1798 ntAPPRIS ALT2 TSL 2 BASIC10.43□□□□□ -0.74
RAB40CQ96S21 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC10.43□□□□□ -0.74
RAB40CQ96S21 KIF18BP1-201ENST00000567585 2264 ntBASIC10.43□□□□□ -0.74
RAB40CQ96S21 KIF25-AS1-202ENST00000456585 2795 ntTSL 2 BASIC10.43□□□□□ -0.74
RAB40CQ96S21 NSD3-202ENST00000317025 10776 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
RAB40CQ96S21 IKZF1-201ENST00000331340 6189 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
RAB40CQ96S21 EFL1-201ENST00000268206 3675 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
RAB40CQ96S21 POLR3E-201ENST00000299853 3697 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
RAB40CQ96S21 ARF4-201ENST00000303436 1660 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
RAB40CQ96S21 C3orf36-201ENST00000408895 1668 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
RAB40CQ96S21 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
RAB40CQ96S21 TAS1R2-201ENST00000375371 2542 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
RAB40CQ96S21 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC10.43□□□□□ -0.74
RAB40CQ96S21 B4GALT1-201ENST00000379731 4201 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
RAB40CQ96S21 ARHGEF10-204ENST00000398564 5480 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
RAB40CQ96S21 ANO1-207ENST00000530676 3289 ntAPPRIS ALT2 TSL 2 BASIC10.43□□□□□ -0.74
RAB40CQ96S21 AL592490.1-201ENST00000409186 6347 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
RAB40CQ96S21 SRRM5-201ENST00000417606 2381 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
RAB40CQ96S21 ANKMY1-201ENST00000272972 3228 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
RAB40CQ96S21 AC004951.1-201ENST00000447643 1866 ntTSL 2 BASIC10.42□□□□□ -0.74
RAB40CQ96S21 ADCY1-201ENST00000297323 12503 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
RAB40CQ96S21 TBC1D3P5-203ENST00000586223 3083 ntTSL 2 BASIC10.42□□□□□ -0.74
RAB40CQ96S21 MED27-201ENST00000292035 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
RAB40CQ96S21 KRT8P38-201ENST00000441370 1430 ntBASIC10.42□□□□□ -0.74
RAB40CQ96S21 DCT-201ENST00000377028 5064 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
RAB40CQ96S21 PMP22-203ENST00000395938 1817 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
RAB40CQ96S21 ATAT1-205ENST00000376483 2646 ntAPPRIS ALT2 TSL 2 BASIC10.42□□□□□ -0.74
RAB40CQ96S21 S1PR3-201ENST00000358157 4206 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
RAB40CQ96S21 STRN-201ENST00000263918 8168 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
RAB40CQ96S21 PAX6-245ENST00000638914 7300 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
RAB40CQ96S21 OR4D9-203ENST00000641962 6123 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
RAB40CQ96S21 NBPF13P-201ENST00000444082 1783 ntBASIC10.42□□□□□ -0.74
RAB40CQ96S21 INCA1-201ENST00000355025 1383 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
RAB40CQ96S21 ARHGEF10L-203ENST00000375408 3685 ntTSL 5 BASIC10.42□□□□□ -0.74
RAB40CQ96S21 PJA1-204ENST00000374584 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
RAB40CQ96S21 HSPB7-201ENST00000311890 2892 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
RAB40CQ96S21 AR-202ENST00000396043 1728 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
RAB40CQ96S21 MIS18BP1-201ENST00000310806 4777 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
RAB40CQ96S21 SNAP25-201ENST00000254976 2053 ntAPPRIS P5 TSL 1 (best) BASIC10.42□□□□□ -0.74
RAB40CQ96S21 SNAP25-202ENST00000304886 2050 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
RAB40CQ96S21 AC019294.1-202ENST00000566174 2071 ntBASIC10.42□□□□□ -0.74
RAB40CQ96S21 SHPRH-211ENST00000629427 7338 ntAPPRIS ALT1 TSL 5 BASIC10.42□□□□□ -0.74
RAB40CQ96S21 RFC5-201ENST00000392542 2449 ntTSL 2 BASIC10.42□□□□□ -0.74
RAB40CQ96S21 GTF2IP13-202ENST00000609439 10247 ntTSL 5 BASIC10.42□□□□□ -0.74
RAB40CQ96S21 ACCS-201ENST00000263776 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
RAB40CQ96S21 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
RAB40CQ96S21 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
RAB40CQ96S21 SOD2-202ENST00000367054 815 ntTSL 2 BASIC10.42□□□□□ -0.74
RAB40CQ96S21 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
RAB40CQ96S21 FAM126A-201ENST00000409763 616 ntTSL 2 BASIC10.42□□□□□ -0.74
RAB40CQ96S21 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC10.42□□□□□ -0.74
RAB40CQ96S21 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC10.42□□□□□ -0.74
RAB40CQ96S21 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
RAB40CQ96S21 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC10.42□□□□□ -0.74
RAB40CQ96S21 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC10.42□□□□□ -0.74
RAB40CQ96S21 RN7SL375P-201ENST00000492442 298 ntBASIC10.42□□□□□ -0.74
RAB40CQ96S21 AC008676.2-201ENST00000519499 741 ntTSL 3 BASIC10.42□□□□□ -0.74
RAB40CQ96S21 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC10.42□□□□□ -0.74
RAB40CQ96S21 NEU3-202ENST00000526068 431 ntTSL 2 BASIC10.42□□□□□ -0.74
RAB40CQ96S21 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
RAB40CQ96S21 RTN3P1-201ENST00000536295 711 ntBASIC10.42□□□□□ -0.74
RAB40CQ96S21 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC10.42□□□□□ -0.74
RAB40CQ96S21 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC10.42□□□□□ -0.74
RAB40CQ96S21 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC10.42□□□□□ -0.74
RAB40CQ96S21 MIR3619-201ENST00000579667 83 ntBASIC10.42□□□□□ -0.74
RAB40CQ96S21 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC10.42□□□□□ -0.74
RAB40CQ96S21 SIGLEC18P-201ENST00000602271 909 ntBASIC10.42□□□□□ -0.74
RAB40CQ96S21 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
RAB40CQ96S21 CU633904.3-201ENST00000624042 1029 ntBASIC10.42□□□□□ -0.74
RAB40CQ96S21 RAB27A-201ENST00000336787 3446 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
RAB40CQ96S21 CDC25C-202ENST00000348983 1951 ntTSL 5 BASIC10.42□□□□□ -0.74
RAB40CQ96S21 CPT1B-203ENST00000395650 2662 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
RAB40CQ96S21 NAB1-201ENST00000337386 4358 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
RAB40CQ96S21 TRAF3IP2-202ENST00000359831 2264 ntAPPRIS ALT1 TSL 2 BASIC10.42□□□□□ -0.74
RAB40CQ96S21 GMPR2-224ENST00000559910 1562 ntTSL 5 BASIC10.42□□□□□ -0.74
RAB40CQ96S21 VIPAS39-206ENST00000553888 2934 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
RAB40CQ96S21 C3orf35-201ENST00000328376 1859 ntAPPRIS P5 TSL 1 (best) BASIC10.42□□□□□ -0.74
RAB40CQ96S21 CHRNA1-208ENST00000636168 1862 ntTSL 5 BASIC10.42□□□□□ -0.74
RAB40CQ96S21 CDC25B-201ENST00000245960 3597 ntAPPRIS P4 TSL 1 (best) BASIC10.42□□□□□ -0.74
RAB40CQ96S21 DOK4-210ENST00000566936 2851 ntTSL 3 BASIC10.42□□□□□ -0.74
RAB40CQ96S21 C1S-203ENST00000402681 2522 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
RAB40CQ96S21 FAM47A-202ENST00000613251 2518 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
RAB40CQ96S21 RNF130-207ENST00000522208 9945 ntTSL 5 BASIC10.42□□□□□ -0.74
RAB40CQ96S21 ZNF544-208ENST00000596825 3516 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
RAB40CQ96S21 F2R-201ENST00000319211 3821 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
RAB40CQ96S21 ABL2-204ENST00000502732 12144 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
RAB40CQ96S21 ABCD1-201ENST00000218104 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
RAB40CQ96S21 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
RAB40CQ96S21 AC067852.6-201ENST00000591237 1736 ntBASIC10.41□□□□□ -0.74
RAB40CQ96S21 PTGS1-201ENST00000223423 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
RAB40CQ96S21 VOPP1-206ENST00000428097 1671 ntTSL 3 BASIC10.41□□□□□ -0.74
RAB40CQ96S21 CCDC33-206ENST00000558821 1993 ntTSL 2 BASIC10.41□□□□□ -0.74
RAB40CQ96S21 CUL7-201ENST00000265348 5254 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
RAB40CQ96S21 GALNT6-202ENST00000543196 5207 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
RAB40CQ96S21 SHANK2-201ENST00000338508 7271 ntTSL 5 BASIC10.41□□□□□ -0.74
RAB40CQ96S21 DGCR11-201ENST00000609958 2214 ntBASIC10.41□□□□□ -0.74
RAB40CQ96S21 NNMT-201ENST00000299964 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
RAB40CQ96S21 ZBED9-201ENST00000452236 4877 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms