Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 IQSEC1-204ENST00000613206 3582 ntTSL 2 BASIC13.41□□□□□ -0.26
SLC1A1P43005 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SLC1A1P43005 FERMT2-201ENST00000341590 3338 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SLC1A1P43005 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
SLC1A1P43005 ENOX2-201ENST00000338144 4263 ntTSL 2 BASIC13.41□□□□□ -0.26
SLC1A1P43005 SLC44A4-202ENST00000229729 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SLC1A1P43005 RP2-201ENST00000218340 3803 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SLC1A1P43005 AL355388.2-201ENST00000610146 2157 ntTSL 4 BASIC13.41□□□□□ -0.26
SLC1A1P43005 ARL4A-203ENST00000396663 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SLC1A1P43005 RGS3-204ENST00000350696 4387 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
SLC1A1P43005 WDR47-201ENST00000357672 4144 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SLC1A1P43005 GLDN-210ENST00000612989 1676 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SLC1A1P43005 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SLC1A1P43005 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SLC1A1P43005 TTN-AS1-264ENST00000627564 1319 ntTSL 5 BASIC13.4□□□□□ -0.26
SLC1A1P43005 TRIT1-201ENST00000316891 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SLC1A1P43005 TMEM174-201ENST00000296776 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SLC1A1P43005 CPNE4-201ENST00000429747 4184 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SLC1A1P43005 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SLC1A1P43005 RFWD3-202ENST00000571750 3033 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
SLC1A1P43005 AC008609.1-202ENST00000501818 2686 ntTSL 2 BASIC13.4□□□□□ -0.26
SLC1A1P43005 YEATS2-201ENST00000305135 6506 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SLC1A1P43005 SLFNL1-202ENST00000359345 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
SLC1A1P43005 PSG9-201ENST00000244293 2073 ntTSL 2 BASIC13.4□□□□□ -0.26
SLC1A1P43005 HSP90AA1-202ENST00000334701 3510 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SLC1A1P43005 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SLC1A1P43005 RNA5SP84-201ENST00000364740 107 ntBASIC13.4□□□□□ -0.26
SLC1A1P43005 CCL19-202ENST00000378800 414 ntTSL 2 BASIC13.4□□□□□ -0.26
SLC1A1P43005 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SLC1A1P43005 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
SLC1A1P43005 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SLC1A1P43005 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC13.4□□□□□ -0.26
SLC1A1P43005 SERF2-205ENST00000403425 690 ntTSL 2 BASIC13.4□□□□□ -0.26
SLC1A1P43005 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC13.4□□□□□ -0.26
SLC1A1P43005 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC13.4□□□□□ -0.26
SLC1A1P43005 AC098934.2-202ENST00000438944 1033 ntBASIC13.4□□□□□ -0.26
SLC1A1P43005 COL18A1-AS2-201ENST00000446475 552 ntTSL 4 BASIC13.4□□□□□ -0.26
SLC1A1P43005 AC113340.1-201ENST00000475257 636 ntBASIC13.4□□□□□ -0.26
SLC1A1P43005 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC13.4□□□□□ -0.26
SLC1A1P43005 AC010267.1-201ENST00000508636 553 ntTSL 4 BASIC13.4□□□□□ -0.26
SLC1A1P43005 MEF2C-AS1-205ENST00000509179 388 ntTSL 5 BASIC13.4□□□□□ -0.26
SLC1A1P43005 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SLC1A1P43005 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC13.4□□□□□ -0.26
SLC1A1P43005 RN7SL605P-201ENST00000577229 281 ntBASIC13.4□□□□□ -0.26
SLC1A1P43005 RN7SL678P-201ENST00000579533 299 ntBASIC13.4□□□□□ -0.26
SLC1A1P43005 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
SLC1A1P43005 UBA52-214ENST00000599595 692 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
SLC1A1P43005 AC009061.2-202ENST00000602596 696 ntTSL 2 BASIC13.4□□□□□ -0.26
SLC1A1P43005 TMEM230-211ENST00000615008 594 ntTSL 4 BASIC13.4□□□□□ -0.26
SLC1A1P43005 AL137028.1-201ENST00000620521 555 ntBASIC13.4□□□□□ -0.26
SLC1A1P43005 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SLC1A1P43005 AC009118.3-201ENST00000622896 873 ntBASIC13.4□□□□□ -0.26
SLC1A1P43005 AL451007.2-201ENST00000632004 563 ntBASIC13.4□□□□□ -0.26
SLC1A1P43005 AC099795.2-201ENST00000639582 440 ntBASIC13.4□□□□□ -0.26
SLC1A1P43005 ZNF582-201ENST00000301310 2824 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SLC1A1P43005 MTUS2-206ENST00000612955 7430 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
SLC1A1P43005 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SLC1A1P43005 C14orf159-203ENST00000412671 2591 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
SLC1A1P43005 LPGAT1-201ENST00000366996 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SLC1A1P43005 RBMXL3-201ENST00000424776 3442 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
SLC1A1P43005 CLDN19-201ENST00000296387 2859 ntTSL 2 BASIC13.4□□□□□ -0.26
SLC1A1P43005 CHST15-201ENST00000346248 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SLC1A1P43005 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SLC1A1P43005 RINT1-201ENST00000257700 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SLC1A1P43005 ZNF740-201ENST00000416904 8578 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SLC1A1P43005 ZNF621-201ENST00000310898 2404 ntTSL 2 BASIC13.4□□□□□ -0.26
SLC1A1P43005 ELMOD3-203ENST00000409013 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SLC1A1P43005 DUSP22-211ENST00000604971 3824 ntTSL 2 BASIC13.4□□□□□ -0.26
SLC1A1P43005 SUN2-202ENST00000405510 4055 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SLC1A1P43005 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SLC1A1P43005 UGT1A3-201ENST00000482026 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SLC1A1P43005 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SLC1A1P43005 KIF22-202ENST00000400751 2493 ntTSL 2 BASIC13.39□□□□□ -0.27
SLC1A1P43005 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC13.39□□□□□ -0.27
SLC1A1P43005 SEMA6D-202ENST00000354744 5931 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SLC1A1P43005 SYNM-203ENST00000560674 5908 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SLC1A1P43005 CXorf38-203ENST00000378426 4895 ntTSL 2 BASIC13.39□□□□□ -0.27
SLC1A1P43005 WWC2-209ENST00000513834 4887 ntTSL 5 BASIC13.39□□□□□ -0.27
SLC1A1P43005 STRA6-204ENST00000423167 2776 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SLC1A1P43005 MRVI1-201ENST00000423302 6126 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
SLC1A1P43005 IGF2BP2-203ENST00000421047 1711 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SLC1A1P43005 PAAF1-215ENST00000544909 1802 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SLC1A1P43005 SMIM21-202ENST00000579022 1834 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
SLC1A1P43005 CACNA2D2-206ENST00000479441 3453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SLC1A1P43005 SLC25A25-205ENST00000432073 3678 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SLC1A1P43005 LIF-201ENST00000249075 3969 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SLC1A1P43005 CCDC175-202ENST00000537690 2616 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
SLC1A1P43005 VAV1-207ENST00000599806 2717 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SLC1A1P43005 VENTX-201ENST00000325980 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SLC1A1P43005 PIGG-201ENST00000310340 3203 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
SLC1A1P43005 MCU-204ENST00000536019 3224 ntTSL 2 BASIC13.39□□□□□ -0.27
SLC1A1P43005 NR3C2-203ENST00000358102 5893 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SLC1A1P43005 CACNB1-212ENST00000622445 3722 ntTSL 5 BASIC13.39□□□□□ -0.27
SLC1A1P43005 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SLC1A1P43005 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SLC1A1P43005 MIR33B-201ENST00000385104 96 ntBASIC13.39□□□□□ -0.27
SLC1A1P43005 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SLC1A1P43005 MARCKSL1P2-201ENST00000401037 976 ntBASIC13.39□□□□□ -0.27
SLC1A1P43005 TXLNGY-202ENST00000407724 1000 ntTSL 3 BASIC13.39□□□□□ -0.27
SLC1A1P43005 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms