Protein–RNA interactions for Protein: Q08209

PPP3CA, Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform, humanhuman

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CAQ08209 MAGED1-201ENST00000326587 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PPP3CAQ08209 TTC39B-202ENST00000380850 3221 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
PPP3CAQ08209 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PPP3CAQ08209 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
PPP3CAQ08209 LDHA-205ENST00000422447 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PPP3CAQ08209 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PPP3CAQ08209 TMX1-201ENST00000457354 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PPP3CAQ08209 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
PPP3CAQ08209 RMND5B-210ENST00000515098 4066 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
PPP3CAQ08209 HIST1H2BH-201ENST00000619466 2060 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
PPP3CAQ08209 GRIK1-203ENST00000389125 3140 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
PPP3CAQ08209 PAX9-202ENST00000402703 3104 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
PPP3CAQ08209 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PPP3CAQ08209 NNMT-201ENST00000299964 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PPP3CAQ08209 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
PPP3CAQ08209 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC13.79□□□□□ -0.2
PPP3CAQ08209 HYOU1-221ENST00000621959 3358 ntTSL 2 BASIC13.79□□□□□ -0.2
PPP3CAQ08209 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC13.79□□□□□ -0.2
PPP3CAQ08209 SYNJ2-208ENST00000640338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
PPP3CAQ08209 AL122018.1-201ENST00000446607 2310 ntBASIC13.79□□□□□ -0.2
PPP3CAQ08209 TGM7-201ENST00000452443 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PPP3CAQ08209 AL121772.1-201ENST00000618303 2335 ntTSL 2 BASIC13.79□□□□□ -0.2
PPP3CAQ08209 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PPP3CAQ08209 AL354861.3-201ENST00000600140 2412 ntBASIC13.79□□□□□ -0.2
PPP3CAQ08209 CLEC10A-206ENST00000576617 1800 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PPP3CAQ08209 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
PPP3CAQ08209 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
PPP3CAQ08209 AP000487.2-201ENST00000324630 394 ntTSL 3 BASIC13.79□□□□□ -0.2
PPP3CAQ08209 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC13.79□□□□□ -0.2
PPP3CAQ08209 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC13.79□□□□□ -0.2
PPP3CAQ08209 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC13.79□□□□□ -0.2
PPP3CAQ08209 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC13.79□□□□□ -0.2
PPP3CAQ08209 AC093367.1-201ENST00000517332 420 ntBASIC13.79□□□□□ -0.2
PPP3CAQ08209 PTK2-225ENST00000520892 571 ntTSL 4 BASIC13.79□□□□□ -0.2
PPP3CAQ08209 LINC01606-208ENST00000521653 557 ntTSL 4 BASIC13.79□□□□□ -0.2
PPP3CAQ08209 AC004801.1-201ENST00000549557 360 ntBASIC13.79□□□□□ -0.2
PPP3CAQ08209 AL031710.1-201ENST00000570022 468 ntTSL 2 BASIC13.79□□□□□ -0.2
PPP3CAQ08209 HNRNPA1P16-201ENST00000575692 955 ntBASIC13.79□□□□□ -0.2
PPP3CAQ08209 AC108673.2-201ENST00000608909 565 ntBASIC13.79□□□□□ -0.2
PPP3CAQ08209 LINC01588-216ENST00000623502 975 ntTSL 2 BASIC13.79□□□□□ -0.2
PPP3CAQ08209 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PPP3CAQ08209 NUF2-201ENST00000271452 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PPP3CAQ08209 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PPP3CAQ08209 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
PPP3CAQ08209 OPRM1-210ENST00000452687 1352 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PPP3CAQ08209 CLU-202ENST00000405140 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PPP3CAQ08209 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
PPP3CAQ08209 CIZ1-205ENST00000372948 2858 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
PPP3CAQ08209 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PPP3CAQ08209 SH3GLB2-206ENST00000417224 1468 ntTSL 5 BASIC13.79□□□□□ -0.2
PPP3CAQ08209 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PPP3CAQ08209 ZNF461-201ENST00000360357 2361 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
PPP3CAQ08209 ARL4A-203ENST00000396663 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PPP3CAQ08209 GRIK1-206ENST00000399913 3234 ntTSL 2 BASIC13.79□□□□□ -0.2
PPP3CAQ08209 NRF1-201ENST00000223190 2424 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
PPP3CAQ08209 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC13.79□□□□□ -0.2
PPP3CAQ08209 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
PPP3CAQ08209 HTR3D-202ENST00000382489 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PPP3CAQ08209 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
PPP3CAQ08209 PAX6-201ENST00000241001 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PPP3CAQ08209 HNRNPMP1-201ENST00000560685 1768 ntBASIC13.78□□□□□ -0.2
PPP3CAQ08209 PTPRN2-202ENST00000389416 4692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
PPP3CAQ08209 AC004951.1-201ENST00000447643 1866 ntTSL 2 BASIC13.78□□□□□ -0.2
PPP3CAQ08209 AL805961.2-201ENST00000642139 4817 ntBASIC13.78□□□□□ -0.2
PPP3CAQ08209 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC13.78□□□□□ -0.2
PPP3CAQ08209 IP6K3-202ENST00000451316 2012 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
PPP3CAQ08209 ENC1-206ENST00000537006 2024 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
PPP3CAQ08209 ZNF501-201ENST00000396048 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PPP3CAQ08209 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PPP3CAQ08209 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PPP3CAQ08209 TRAPPC2L-211ENST00000565504 3102 ntTSL 2 BASIC13.78□□□□□ -0.2
PPP3CAQ08209 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC13.78□□□□□ -0.2
PPP3CAQ08209 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PPP3CAQ08209 TAF1C-201ENST00000341690 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
PPP3CAQ08209 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PPP3CAQ08209 LMO7DN-201ENST00000318245 1167 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
PPP3CAQ08209 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
PPP3CAQ08209 CACYBPP3-201ENST00000406011 625 ntBASIC13.78□□□□□ -0.2
PPP3CAQ08209 AC092865.2-201ENST00000439409 971 ntBASIC13.78□□□□□ -0.2
PPP3CAQ08209 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC13.78□□□□□ -0.2
PPP3CAQ08209 HLA-DRB9-201ENST00000449413 343 ntBASIC13.78□□□□□ -0.2
PPP3CAQ08209 KRT18P66-201ENST00000452970 1269 ntBASIC13.78□□□□□ -0.2
PPP3CAQ08209 RPS18P9-201ENST00000482817 460 ntBASIC13.78□□□□□ -0.2
PPP3CAQ08209 GYG1-209ENST00000483267 801 ntTSL 2 BASIC13.78□□□□□ -0.2
PPP3CAQ08209 AF274856.1-202ENST00000509345 871 ntTSL 4 BASIC13.78□□□□□ -0.2
PPP3CAQ08209 MIR2278-201ENST00000516344 96 ntBASIC13.78□□□□□ -0.2
PPP3CAQ08209 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC13.78□□□□□ -0.2
PPP3CAQ08209 IGHEP1-201ENST00000521393 651 ntBASIC13.78□□□□□ -0.2
PPP3CAQ08209 AL139099.3-201ENST00000556657 401 ntTSL 3 BASIC13.78□□□□□ -0.2
PPP3CAQ08209 GRAMD4P6-201ENST00000556999 244 ntBASIC13.78□□□□□ -0.2
PPP3CAQ08209 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC13.78□□□□□ -0.2
PPP3CAQ08209 MIR4539-201ENST00000579784 60 ntBASIC13.78□□□□□ -0.2
PPP3CAQ08209 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC13.78□□□□□ -0.2
PPP3CAQ08209 PACRG-AS3-204ENST00000620150 567 ntTSL 4 BASIC13.78□□□□□ -0.2
PPP3CAQ08209 AC016526.4-201ENST00000636059 517 ntTSL 3 BASIC13.78□□□□□ -0.2
PPP3CAQ08209 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC13.78□□□□□ -0.2
PPP3CAQ08209 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC13.78□□□□□ -0.2
PPP3CAQ08209 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
PPP3CAQ08209 FBXO34-202ENST00000440021 2831 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
PPP3CAQ08209 PSMD12-201ENST00000356126 4406 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms