Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
O00370 IL32-230ENST00000551122 733 ntAPPRIS ALT2 TSL 3 BASIC13.72□□□□□ -0.21
O00370 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC13.72□□□□□ -0.21
O00370 AL590235.1-201ENST00000564650 861 ntBASIC13.72□□□□□ -0.21
O00370 RBMX-209ENST00000565438 1292 ntTSL 5 BASIC13.72□□□□□ -0.21
O00370 PRR20FP-201ENST00000603320 180 ntBASIC13.72□□□□□ -0.21
O00370 MIR6756-201ENST00000616240 63 ntBASIC13.72□□□□□ -0.21
O00370 SUCLG2-203ENST00000492795 1512 ntTSL 2 BASIC13.72□□□□□ -0.21
O00370 SH2D7-201ENST00000328828 2750 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
O00370 LYPD5-201ENST00000377950 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
O00370 CPNE1-201ENST00000317677 1961 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
O00370 AL590428.1-201ENST00000428865 1973 ntTSL 2 BASIC13.72□□□□□ -0.21
O00370 OCA2-202ENST00000354638 3186 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
O00370 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
O00370 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
O00370 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
O00370 PCLAF-201ENST00000300035 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
O00370 ALOX5-208ENST00000612635 1945 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
O00370 GLP1R-201ENST00000373256 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
O00370 AC087164.2-201ENST00000624514 3130 ntBASIC13.72□□□□□ -0.21
O00370 TTC39B-202ENST00000380850 3221 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
O00370 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
O00370 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
O00370 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
O00370 STRADA-202ENST00000336174 2255 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
O00370 AC090136.3-201ENST00000520834 2704 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
O00370 FBXO44-202ENST00000251547 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
O00370 CREB5-202ENST00000396298 2001 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
O00370 FAM133B-204ENST00000445716 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
O00370 PLOD2-209ENST00000494950 2908 ntTSL 2 BASIC13.71□□□□□ -0.21
O00370 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
O00370 PNMA5-204ENST00000452693 3113 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.21
O00370 CD27-AS1-209ENST00000545339 1766 ntTSL 5 BASIC13.71□□□□□ -0.21
O00370 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
O00370 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC13.71□□□□□ -0.21
O00370 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
O00370 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
O00370 CHST4-202ENST00000539698 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
O00370 DFFB-205ENST00000378209 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
O00370 OR2T33-201ENST00000318021 1066 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
O00370 ZNF662-202ENST00000422021 436 ntTSL 2 BASIC13.71□□□□□ -0.21
O00370 AL358876.2-201ENST00000424689 477 ntTSL 3 BASIC13.71□□□□□ -0.21
O00370 AC027612.2-201ENST00000436174 1145 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
O00370 PRKRIP1-202ENST00000462601 884 ntTSL 2 BASIC13.71□□□□□ -0.21
O00370 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC13.71□□□□□ -0.21
O00370 MIR4527HG-201ENST00000586905 675 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
O00370 AC245595.2-201ENST00000620141 1144 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
O00370 DIDO1-202ENST00000354665 2707 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
O00370 SLC26A6-203ENST00000358747 2729 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
O00370 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
O00370 ATAT1-202ENST00000319027 2061 ntTSL 2 BASIC13.71□□□□□ -0.21
O00370 CYLD-214ENST00000569418 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
O00370 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
O00370 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
O00370 ZUFSP-202ENST00000368576 2195 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
O00370 AC080013.1-204ENST00000607426 2185 ntBASIC13.71□□□□□ -0.22
O00370 FAM238C-202ENST00000639963 1787 ntTSL 2 BASIC13.71□□□□□ -0.22
O00370 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
O00370 PLAT-202ENST00000352041 2516 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
O00370 IQUB-202ENST00000466202 3296 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
O00370 TRIM46-201ENST00000334634 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
O00370 CHRDL2-201ENST00000263671 1712 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
O00370 P2RX1-201ENST00000225538 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
O00370 DCLRE1C-208ENST00000378258 2463 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
O00370 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
O00370 SPDYE8P-201ENST00000333385 2281 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
O00370 SPDYE11-201ENST00000340073 2281 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
O00370 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
O00370 SPDYE9P-203ENST00000575125 2281 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
O00370 VAV1-202ENST00000539284 2627 ntTSL 5 BASIC13.7□□□□□ -0.22
O00370 RNF219-AS1-209ENST00000606429 2418 ntTSL 2 BASIC13.7□□□□□ -0.22
O00370 ADCK1-201ENST00000238561 2234 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
O00370 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
O00370 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
O00370 AL357509.1-201ENST00000641892 2013 ntBASIC13.7□□□□□ -0.22
O00370 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
O00370 SMIM21-202ENST00000579022 1834 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
O00370 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
O00370 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC13.7□□□□□ -0.22
O00370 ASPDH-201ENST00000376916 848 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
O00370 FOLR1-204ENST00000393681 1061 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
O00370 AP001331.1-201ENST00000413008 1015 ntBASIC13.7□□□□□ -0.22
O00370 IGHV3-74-201ENST00000424969 587 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
O00370 CDCA4P4-201ENST00000435216 680 ntBASIC13.7□□□□□ -0.22
O00370 NME6-208ENST00000435684 599 ntTSL 2 BASIC13.7□□□□□ -0.22
O00370 KRT18P66-201ENST00000452970 1269 ntBASIC13.7□□□□□ -0.22
O00370 H1FOO-202ENST00000503977 881 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
O00370 NMNAT3-212ENST00000511444 873 ntTSL 3 BASIC13.7□□□□□ -0.22
O00370 PTK2-225ENST00000520892 571 ntTSL 4 BASIC13.7□□□□□ -0.22
O00370 HNRNPA1P7-201ENST00000521273 963 ntBASIC13.7□□□□□ -0.22
O00370 AC063924.1-201ENST00000546680 673 ntBASIC13.7□□□□□ -0.22
O00370 AC025257.1-201ENST00000550926 375 ntTSL 3 BASIC13.7□□□□□ -0.22
O00370 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC13.7□□□□□ -0.22
O00370 AL022344.2-201ENST00000568976 968 ntBASIC13.7□□□□□ -0.22
O00370 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC13.7□□□□□ -0.22
O00370 SFTPA2-205ENST00000640627 195 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
O00370 TJAP1-201ENST00000259751 2720 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
O00370 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
O00370 ARHGEF10L-202ENST00000361221 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
O00370 CICP2-201ENST00000420675 2328 ntBASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms