Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 NRSN2-206ENST00000608736 712 ntTSL 3 BASIC12.76□□□□□ -0.37
SATB2Q9UPW6 AL162731.1-201ENST00000613248 876 ntTSL 3 BASIC12.76□□□□□ -0.37
SATB2Q9UPW6 Metazoa_SRP.173-201ENST00000614020 273 ntBASIC12.76□□□□□ -0.37
SATB2Q9UPW6 ZFAS1-208ENST00000618800 597 ntTSL 3 BASIC12.76□□□□□ -0.37
SATB2Q9UPW6 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC12.76□□□□□ -0.37
SATB2Q9UPW6 PPP1R8-203ENST00000373931 2651 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SATB2Q9UPW6 AC026786.1-201ENST00000540096 1374 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
SATB2Q9UPW6 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
SATB2Q9UPW6 CYP2B6-202ENST00000593831 1426 ntTSL 2 BASIC12.76□□□□□ -0.37
SATB2Q9UPW6 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SATB2Q9UPW6 LINC02226-201ENST00000501071 1587 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SATB2Q9UPW6 MCRS1-203ENST00000546244 1686 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SATB2Q9UPW6 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
SATB2Q9UPW6 SLC2A14-205ENST00000535295 1732 ntTSL 2 BASIC12.76□□□□□ -0.37
SATB2Q9UPW6 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC12.76□□□□□ -0.37
SATB2Q9UPW6 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC12.76□□□□□ -0.37
SATB2Q9UPW6 CNTNAP2-201ENST00000361727 9896 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SATB2Q9UPW6 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SATB2Q9UPW6 BHMT2-201ENST00000255192 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SATB2Q9UPW6 AL591806.3-201ENST00000289779 2096 ntAPPRIS P5 TSL 2 BASIC12.76□□□□□ -0.37
SATB2Q9UPW6 LINC00442-202ENST00000456737 2063 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SATB2Q9UPW6 AC115284.2-201ENST00000624646 2054 ntBASIC12.76□□□□□ -0.37
SATB2Q9UPW6 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
SATB2Q9UPW6 TRPC7-201ENST00000352189 2241 ntTSL 5 BASIC12.76□□□□□ -0.37
SATB2Q9UPW6 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SATB2Q9UPW6 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SATB2Q9UPW6 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC12.76□□□□□ -0.37
SATB2Q9UPW6 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC12.76□□□□□ -0.37
SATB2Q9UPW6 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC12.76□□□□□ -0.37
SATB2Q9UPW6 POM121L9P-201ENST00000414583 5018 ntTSL 2 BASIC12.75□□□□□ -0.37
SATB2Q9UPW6 EXOSC7-201ENST00000265564 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SATB2Q9UPW6 COMMD10-201ENST00000274458 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SATB2Q9UPW6 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC12.75□□□□□ -0.37
SATB2Q9UPW6 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
SATB2Q9UPW6 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SATB2Q9UPW6 EEF1G-201ENST00000329251 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SATB2Q9UPW6 HLA-DQA1-201ENST00000343139 1591 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
SATB2Q9UPW6 INCA1-201ENST00000355025 1383 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
SATB2Q9UPW6 AC131011.1-201ENST00000366134 672 ntTSL 3 BASIC12.75□□□□□ -0.37
SATB2Q9UPW6 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SATB2Q9UPW6 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC12.75□□□□□ -0.37
SATB2Q9UPW6 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
SATB2Q9UPW6 GABRR2-201ENST00000402938 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SATB2Q9UPW6 RFNG-202ENST00000429557 994 ntTSL 5 BASIC12.75□□□□□ -0.37
SATB2Q9UPW6 CICP7-201ENST00000432723 2477 ntBASIC12.75□□□□□ -0.37
SATB2Q9UPW6 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC12.75□□□□□ -0.37
SATB2Q9UPW6 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SATB2Q9UPW6 NR1H3-217ENST00000467728 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SATB2Q9UPW6 FHIT-205ENST00000476844 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SATB2Q9UPW6 C10orf90-207ENST00000480379 1012 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
SATB2Q9UPW6 AC104115.1-201ENST00000484005 623 ntBASIC12.75□□□□□ -0.37
SATB2Q9UPW6 KRT18P42-201ENST00000505048 1255 ntBASIC12.75□□□□□ -0.37
SATB2Q9UPW6 AC090200.1-201ENST00000522918 590 ntTSL 2 BASIC12.75□□□□□ -0.37
SATB2Q9UPW6 GOLGA8G-203ENST00000525590 2009 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
SATB2Q9UPW6 GOLGA8F-202ENST00000532622 2009 ntAPPRIS P5 TSL 5 BASIC12.75□□□□□ -0.37
SATB2Q9UPW6 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC12.75□□□□□ -0.37
SATB2Q9UPW6 SNHG14-212ENST00000549804 7844 ntTSL 5 BASIC12.75□□□□□ -0.37
SATB2Q9UPW6 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
SATB2Q9UPW6 AL136040.1-201ENST00000557775 601 ntTSL 3 BASIC12.75□□□□□ -0.37
SATB2Q9UPW6 AC005096.1-201ENST00000560499 622 ntTSL 3 BASIC12.75□□□□□ -0.37
SATB2Q9UPW6 REXO5-208ENST00000564274 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SATB2Q9UPW6 AC092720.1-202ENST00000565824 555 ntTSL 4 BASIC12.75□□□□□ -0.37
SATB2Q9UPW6 TNK1-201ENST00000570896 3122 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
SATB2Q9UPW6 Metazoa_SRP.147-201ENST00000576563 312 ntBASIC12.75□□□□□ -0.37
SATB2Q9UPW6 AC006504.5-210ENST00000585827 539 ntTSL 4 BASIC12.75□□□□□ -0.37
SATB2Q9UPW6 AC007292.1-201ENST00000594444 746 ntTSL 2 BASIC12.75□□□□□ -0.37
SATB2Q9UPW6 AC034205.3-201ENST00000603595 1376 ntBASIC12.75□□□□□ -0.37
SATB2Q9UPW6 AC092535.4-201ENST00000609548 397 ntBASIC12.75□□□□□ -0.37
SATB2Q9UPW6 MIR6125-201ENST00000618986 96 ntBASIC12.75□□□□□ -0.37
SATB2Q9UPW6 PACRG-AS3-204ENST00000620150 567 ntTSL 4 BASIC12.75□□□□□ -0.37
SATB2Q9UPW6 AL031587.5-201ENST00000624344 1849 ntBASIC12.75□□□□□ -0.37
SATB2Q9UPW6 AC015813.5-201ENST00000624641 1514 ntBASIC12.75□□□□□ -0.37
SATB2Q9UPW6 COG6-212ENST00000630730 186 ntTSL 5 BASIC12.75□□□□□ -0.37
SATB2Q9UPW6 Z98257.2-202ENST00000641138 1548 ntBASIC12.75□□□□□ -0.37
SATB2Q9UPW6 SSX2IP-201ENST00000342203 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SATB2Q9UPW6 SFMBT2-201ENST00000361972 7922 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SATB2Q9UPW6 MED24-204ENST00000394128 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SATB2Q9UPW6 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SATB2Q9UPW6 EGFR-AS1-201ENST00000442411 2806 ntTSL 2 BASIC12.75□□□□□ -0.37
SATB2Q9UPW6 TMEM164-204ENST00000372073 5567 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
SATB2Q9UPW6 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SATB2Q9UPW6 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SATB2Q9UPW6 UBTF-209ENST00000529383 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SATB2Q9UPW6 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SATB2Q9UPW6 FAM133B-204ENST00000445716 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SATB2Q9UPW6 LRTM2-208ENST00000543818 3986 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
SATB2Q9UPW6 TBC1D22A-203ENST00000380995 3934 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SATB2Q9UPW6 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC12.74□□□□□ -0.37
SATB2Q9UPW6 OFD1-203ENST00000380567 3736 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
SATB2Q9UPW6 TRAPPC4-214ENST00000533632 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SATB2Q9UPW6 SP140L-205ENST00000458341 1727 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SATB2Q9UPW6 SPTB-204ENST00000389722 10063 ntTSL 2 BASIC12.74□□□□□ -0.37
SATB2Q9UPW6 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SATB2Q9UPW6 DAP3-201ENST00000343043 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SATB2Q9UPW6 TRIML2-207ENST00000512729 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SATB2Q9UPW6 COPS5-203ENST00000517736 1621 ntTSL 5 BASIC12.74□□□□□ -0.37
SATB2Q9UPW6 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SATB2Q9UPW6 POMT1-203ENST00000372228 3123 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SATB2Q9UPW6 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SATB2Q9UPW6 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms