Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHB1Q9Y5F3 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.89■■□□□ 1.09
PCDHB1Q9Y5F3 AC006455.2-201ENST00000429931 906 ntBASIC21.89■■□□□ 1.09
PCDHB1Q9Y5F3 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHB1Q9Y5F3 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.89■■□□□ 1.09
PCDHB1Q9Y5F3 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.89■■□□□ 1.09
PCDHB1Q9Y5F3 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.89■■□□□ 1.09
PCDHB1Q9Y5F3 AC136469.2-201ENST00000623944 1028 ntBASIC21.89■■□□□ 1.09
PCDHB1Q9Y5F3 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHB1Q9Y5F3 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHB1Q9Y5F3 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.89■■□□□ 1.09
PCDHB1Q9Y5F3 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHB1Q9Y5F3 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.89■■□□□ 1.09
PCDHB1Q9Y5F3 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHB1Q9Y5F3 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.89■■□□□ 1.09
PCDHB1Q9Y5F3 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHB1Q9Y5F3 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHB1Q9Y5F3 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHB1Q9Y5F3 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHB1Q9Y5F3 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHB1Q9Y5F3 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
PCDHB1Q9Y5F3 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.88■■□□□ 1.09
PCDHB1Q9Y5F3 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHB1Q9Y5F3 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHB1Q9Y5F3 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHB1Q9Y5F3 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.88■■□□□ 1.09
PCDHB1Q9Y5F3 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.88■■□□□ 1.09
PCDHB1Q9Y5F3 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.88■■□□□ 1.09
PCDHB1Q9Y5F3 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHB1Q9Y5F3 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.88■■□□□ 1.09
PCDHB1Q9Y5F3 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHB1Q9Y5F3 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHB1Q9Y5F3 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHB1Q9Y5F3 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
PCDHB1Q9Y5F3 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHB1Q9Y5F3 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHB1Q9Y5F3 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHB1Q9Y5F3 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.87■■□□□ 1.09
PCDHB1Q9Y5F3 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHB1Q9Y5F3 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.87■■□□□ 1.09
PCDHB1Q9Y5F3 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHB1Q9Y5F3 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
PCDHB1Q9Y5F3 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.86■■□□□ 1.09
PCDHB1Q9Y5F3 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.86■■□□□ 1.09
PCDHB1Q9Y5F3 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
PCDHB1Q9Y5F3 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHB1Q9Y5F3 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHB1Q9Y5F3 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHB1Q9Y5F3 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHB1Q9Y5F3 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.86■■□□□ 1.09
PCDHB1Q9Y5F3 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
PCDHB1Q9Y5F3 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
PCDHB1Q9Y5F3 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHB1Q9Y5F3 AC233723.2-201ENST00000623798 2106 ntBASIC21.86■■□□□ 1.09
PCDHB1Q9Y5F3 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
PCDHB1Q9Y5F3 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHB1Q9Y5F3 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHB1Q9Y5F3 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHB1Q9Y5F3 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHB1Q9Y5F3 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
PCDHB1Q9Y5F3 AC233992.3-201ENST00000607491 485 ntBASIC21.85■■□□□ 1.09
PCDHB1Q9Y5F3 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.85■■□□□ 1.09
PCDHB1Q9Y5F3 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
PCDHB1Q9Y5F3 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.85■■□□□ 1.09
PCDHB1Q9Y5F3 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.85■■□□□ 1.09
PCDHB1Q9Y5F3 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.85■■□□□ 1.09
PCDHB1Q9Y5F3 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHB1Q9Y5F3 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
PCDHB1Q9Y5F3 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHB1Q9Y5F3 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHB1Q9Y5F3 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
PCDHB1Q9Y5F3 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHB1Q9Y5F3 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHB1Q9Y5F3 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.84■■□□□ 1.09
PCDHB1Q9Y5F3 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHB1Q9Y5F3 AC090192.1-201ENST00000517740 490 ntBASIC21.84■■□□□ 1.09
PCDHB1Q9Y5F3 IKBKGP1-201ENST00000612193 1073 ntBASIC21.84■■□□□ 1.09
PCDHB1Q9Y5F3 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHB1Q9Y5F3 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHB1Q9Y5F3 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHB1Q9Y5F3 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
PCDHB1Q9Y5F3 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHB1Q9Y5F3 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.84■■□□□ 1.09
PCDHB1Q9Y5F3 AC004687.1-201ENST00000579003 1625 ntBASIC21.84■■□□□ 1.09
PCDHB1Q9Y5F3 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHB1Q9Y5F3 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHB1Q9Y5F3 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
PCDHB1Q9Y5F3 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHB1Q9Y5F3 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHB1Q9Y5F3 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHB1Q9Y5F3 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.83■■□□□ 1.09
PCDHB1Q9Y5F3 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
PCDHB1Q9Y5F3 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
PCDHB1Q9Y5F3 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHB1Q9Y5F3 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHB1Q9Y5F3 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.82■■□□□ 1.08
PCDHB1Q9Y5F3 RARRES2P11-201ENST00000635158 484 ntBASIC21.82■■□□□ 1.08
PCDHB1Q9Y5F3 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCDHB1Q9Y5F3 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.82■■□□□ 1.08
PCDHB1Q9Y5F3 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.82■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms