Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC22.24■■□□□ 1.15
PCDHB9Q9Y5E1 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHB9Q9Y5E1 ME2-208ENST00000638937 2471 ntTSL 5 BASIC22.24■■□□□ 1.15
PCDHB9Q9Y5E1 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHB9Q9Y5E1 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHB9Q9Y5E1 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC22.23■■□□□ 1.15
PCDHB9Q9Y5E1 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHB9Q9Y5E1 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHB9Q9Y5E1 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
PCDHB9Q9Y5E1 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC22.23■■□□□ 1.15
PCDHB9Q9Y5E1 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC22.23■■□□□ 1.15
PCDHB9Q9Y5E1 SNX3-202ENST00000349379 890 ntTSL 2 BASIC22.23■■□□□ 1.15
PCDHB9Q9Y5E1 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHB9Q9Y5E1 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHB9Q9Y5E1 NME4-202ENST00000382940 766 ntTSL 3 BASIC22.23■■□□□ 1.15
PCDHB9Q9Y5E1 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
PCDHB9Q9Y5E1 NME4-211ENST00000620944 1193 ntTSL 2 BASIC22.23■■□□□ 1.15
PCDHB9Q9Y5E1 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
PCDHB9Q9Y5E1 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
PCDHB9Q9Y5E1 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
PCDHB9Q9Y5E1 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC22.22■■□□□ 1.15
PCDHB9Q9Y5E1 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC22.22■■□□□ 1.15
PCDHB9Q9Y5E1 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
PCDHB9Q9Y5E1 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC22.22■■□□□ 1.15
PCDHB9Q9Y5E1 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
PCDHB9Q9Y5E1 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.22■■□□□ 1.15
PCDHB9Q9Y5E1 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
PCDHB9Q9Y5E1 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHB9Q9Y5E1 KRT18P5-201ENST00000436075 1291 ntBASIC22.22■■□□□ 1.15
PCDHB9Q9Y5E1 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC22.22■■□□□ 1.15
PCDHB9Q9Y5E1 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHB9Q9Y5E1 OR2I1P-207ENST00000453522 948 ntBASIC22.22■■□□□ 1.15
PCDHB9Q9Y5E1 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC22.22■■□□□ 1.15
PCDHB9Q9Y5E1 AC010525.1-201ENST00000585559 441 ntBASIC22.22■■□□□ 1.15
PCDHB9Q9Y5E1 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC22.22■■□□□ 1.15
PCDHB9Q9Y5E1 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHB9Q9Y5E1 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHB9Q9Y5E1 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
PCDHB9Q9Y5E1 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHB9Q9Y5E1 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHB9Q9Y5E1 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHB9Q9Y5E1 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
PCDHB9Q9Y5E1 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHB9Q9Y5E1 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
PCDHB9Q9Y5E1 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC22.21■■□□□ 1.15
PCDHB9Q9Y5E1 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHB9Q9Y5E1 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHB9Q9Y5E1 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHB9Q9Y5E1 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHB9Q9Y5E1 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
PCDHB9Q9Y5E1 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
PCDHB9Q9Y5E1 YBX1P1-201ENST00000445822 960 ntBASIC22.21■■□□□ 1.15
PCDHB9Q9Y5E1 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC22.21■■□□□ 1.15
PCDHB9Q9Y5E1 STX4-202ENST00000394998 1498 ntTSL 2 BASIC22.21■■□□□ 1.15
PCDHB9Q9Y5E1 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC22.21■■□□□ 1.15
PCDHB9Q9Y5E1 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC22.21■■□□□ 1.15
PCDHB9Q9Y5E1 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
PCDHB9Q9Y5E1 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC22.21■■□□□ 1.15
PCDHB9Q9Y5E1 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
PCDHB9Q9Y5E1 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC22.2■■□□□ 1.14
PCDHB9Q9Y5E1 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHB9Q9Y5E1 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHB9Q9Y5E1 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC22.2■■□□□ 1.14
PCDHB9Q9Y5E1 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC22.2■■□□□ 1.14
PCDHB9Q9Y5E1 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
PCDHB9Q9Y5E1 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC22.2■■□□□ 1.14
PCDHB9Q9Y5E1 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHB9Q9Y5E1 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
PCDHB9Q9Y5E1 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
PCDHB9Q9Y5E1 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHB9Q9Y5E1 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC22.2■■□□□ 1.14
PCDHB9Q9Y5E1 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHB9Q9Y5E1 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC22.19■■□□□ 1.14
PCDHB9Q9Y5E1 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHB9Q9Y5E1 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
PCDHB9Q9Y5E1 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHB9Q9Y5E1 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHB9Q9Y5E1 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC22.19■■□□□ 1.14
PCDHB9Q9Y5E1 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC22.19■■□□□ 1.14
PCDHB9Q9Y5E1 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHB9Q9Y5E1 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHB9Q9Y5E1 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHB9Q9Y5E1 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
PCDHB9Q9Y5E1 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC22.18■■□□□ 1.14
PCDHB9Q9Y5E1 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
PCDHB9Q9Y5E1 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHB9Q9Y5E1 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
PCDHB9Q9Y5E1 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHB9Q9Y5E1 HACD1-201ENST00000326961 773 ntTSL 2 BASIC22.18■■□□□ 1.14
PCDHB9Q9Y5E1 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHB9Q9Y5E1 GCA-201ENST00000233612 1694 ntTSL 2 BASIC22.17■■□□□ 1.14
PCDHB9Q9Y5E1 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
PCDHB9Q9Y5E1 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHB9Q9Y5E1 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
PCDHB9Q9Y5E1 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
PCDHB9Q9Y5E1 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHB9Q9Y5E1 AC004911.1-201ENST00000416316 871 ntBASIC22.17■■□□□ 1.14
PCDHB9Q9Y5E1 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC22.17■■□□□ 1.14
PCDHB9Q9Y5E1 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC22.17■■□□□ 1.14
PCDHB9Q9Y5E1 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms