Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
FNDC3AQ9Y2H6 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC22.26■■□□□ 1.15
FNDC3AQ9Y2H6 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC22.26■■□□□ 1.15
FNDC3AQ9Y2H6 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
FNDC3AQ9Y2H6 DUSP8P3-201ENST00000399571 1760 ntBASIC22.26■■□□□ 1.15
FNDC3AQ9Y2H6 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC22.26■■□□□ 1.15
FNDC3AQ9Y2H6 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
FNDC3AQ9Y2H6 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
FNDC3AQ9Y2H6 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
FNDC3AQ9Y2H6 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
FNDC3AQ9Y2H6 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC22.26■■□□□ 1.15
FNDC3AQ9Y2H6 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC22.26■■□□□ 1.15
FNDC3AQ9Y2H6 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
FNDC3AQ9Y2H6 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
FNDC3AQ9Y2H6 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
FNDC3AQ9Y2H6 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC22.25■■□□□ 1.15
FNDC3AQ9Y2H6 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
FNDC3AQ9Y2H6 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
FNDC3AQ9Y2H6 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC22.25■■□□□ 1.15
FNDC3AQ9Y2H6 AC126544.1-201ENST00000580842 1059 ntBASIC22.25■■□□□ 1.15
FNDC3AQ9Y2H6 AC022517.1-201ENST00000592429 346 ntBASIC22.25■■□□□ 1.15
FNDC3AQ9Y2H6 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC22.25■■□□□ 1.15
FNDC3AQ9Y2H6 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
FNDC3AQ9Y2H6 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
FNDC3AQ9Y2H6 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
FNDC3AQ9Y2H6 RARA-203ENST00000394086 2008 ntTSL 2 BASIC22.24■■□□□ 1.15
FNDC3AQ9Y2H6 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
FNDC3AQ9Y2H6 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
FNDC3AQ9Y2H6 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC22.24■■□□□ 1.15
FNDC3AQ9Y2H6 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
FNDC3AQ9Y2H6 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC22.24■■□□□ 1.15
FNDC3AQ9Y2H6 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
FNDC3AQ9Y2H6 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC22.24■■□□□ 1.15
FNDC3AQ9Y2H6 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
FNDC3AQ9Y2H6 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC22.24■■□□□ 1.15
FNDC3AQ9Y2H6 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC22.24■■□□□ 1.15
FNDC3AQ9Y2H6 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
FNDC3AQ9Y2H6 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
FNDC3AQ9Y2H6 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
FNDC3AQ9Y2H6 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
FNDC3AQ9Y2H6 YBX1P1-201ENST00000445822 960 ntBASIC22.24■■□□□ 1.15
FNDC3AQ9Y2H6 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC22.24■■□□□ 1.15
FNDC3AQ9Y2H6 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC22.24■■□□□ 1.15
FNDC3AQ9Y2H6 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC22.24■■□□□ 1.15
FNDC3AQ9Y2H6 pRNA.6-201ENST00000610482 90 ntBASIC22.24■■□□□ 1.15
FNDC3AQ9Y2H6 pRNA.5-201ENST00000612139 90 ntBASIC22.24■■□□□ 1.15
FNDC3AQ9Y2H6 pRNA.11-201ENST00000618423 90 ntBASIC22.24■■□□□ 1.15
FNDC3AQ9Y2H6 pRNA.13-201ENST00000619112 90 ntBASIC22.24■■□□□ 1.15
FNDC3AQ9Y2H6 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC22.24■■□□□ 1.15
FNDC3AQ9Y2H6 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
FNDC3AQ9Y2H6 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC22.24■■□□□ 1.15
FNDC3AQ9Y2H6 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC22.24■■□□□ 1.15
FNDC3AQ9Y2H6 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
FNDC3AQ9Y2H6 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
FNDC3AQ9Y2H6 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC22.23■■□□□ 1.15
FNDC3AQ9Y2H6 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC22.23■■□□□ 1.15
FNDC3AQ9Y2H6 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC22.23■■□□□ 1.15
FNDC3AQ9Y2H6 KRT18P5-201ENST00000436075 1291 ntBASIC22.23■■□□□ 1.15
FNDC3AQ9Y2H6 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC22.23■■□□□ 1.15
FNDC3AQ9Y2H6 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
FNDC3AQ9Y2H6 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC22.23■■□□□ 1.15
FNDC3AQ9Y2H6 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
FNDC3AQ9Y2H6 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.23■■□□□ 1.15
FNDC3AQ9Y2H6 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
FNDC3AQ9Y2H6 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC22.23■■□□□ 1.15
FNDC3AQ9Y2H6 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
FNDC3AQ9Y2H6 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
FNDC3AQ9Y2H6 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC22.22■■□□□ 1.15
FNDC3AQ9Y2H6 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
FNDC3AQ9Y2H6 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
FNDC3AQ9Y2H6 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
FNDC3AQ9Y2H6 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC22.22■■□□□ 1.15
FNDC3AQ9Y2H6 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
FNDC3AQ9Y2H6 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
FNDC3AQ9Y2H6 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC22.22■■□□□ 1.15
FNDC3AQ9Y2H6 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC22.22■■□□□ 1.15
FNDC3AQ9Y2H6 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
FNDC3AQ9Y2H6 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
FNDC3AQ9Y2H6 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
FNDC3AQ9Y2H6 FP325331.1-202ENST00000623531 1380 ntBASIC22.22■■□□□ 1.15
FNDC3AQ9Y2H6 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
FNDC3AQ9Y2H6 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
FNDC3AQ9Y2H6 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC22.22■■□□□ 1.15
FNDC3AQ9Y2H6 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
FNDC3AQ9Y2H6 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
FNDC3AQ9Y2H6 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
FNDC3AQ9Y2H6 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
FNDC3AQ9Y2H6 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC22.21■■□□□ 1.15
FNDC3AQ9Y2H6 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC22.21■■□□□ 1.15
FNDC3AQ9Y2H6 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC22.21■■□□□ 1.15
FNDC3AQ9Y2H6 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
FNDC3AQ9Y2H6 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC22.21■■□□□ 1.15
FNDC3AQ9Y2H6 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
FNDC3AQ9Y2H6 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC22.21■■□□□ 1.15
FNDC3AQ9Y2H6 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC22.21■■□□□ 1.15
FNDC3AQ9Y2H6 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC22.21■■□□□ 1.15
FNDC3AQ9Y2H6 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
FNDC3AQ9Y2H6 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC22.21■■□□□ 1.15
FNDC3AQ9Y2H6 TSPY26P-201ENST00000476365 1326 ntBASIC22.21■■□□□ 1.15
FNDC3AQ9Y2H6 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC22.21■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms