Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC9.24□□□□□ -0.93
MACF1Q9UPN3 BX005040.4-201ENST00000637145 1518 ntBASIC9.24□□□□□ -0.93
MACF1Q9UPN3 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
MACF1Q9UPN3 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
MACF1Q9UPN3 TOLLIP-AS1-201ENST00000530897 939 ntBASIC9.24□□□□□ -0.93
MACF1Q9UPN3 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC9.24□□□□□ -0.93
MACF1Q9UPN3 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
MACF1Q9UPN3 METTL23-204ENST00000586752 904 ntTSL 2 BASIC9.24□□□□□ -0.93
MACF1Q9UPN3 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC9.24□□□□□ -0.93
MACF1Q9UPN3 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC9.24□□□□□ -0.93
MACF1Q9UPN3 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
MACF1Q9UPN3 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
MACF1Q9UPN3 NME3-204ENST00000563498 920 ntTSL 2 BASIC9.24□□□□□ -0.93
MACF1Q9UPN3 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC9.24□□□□□ -0.93
MACF1Q9UPN3 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
MACF1Q9UPN3 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
MACF1Q9UPN3 REXO2-216ENST00000544196 452 ntTSL 3 BASIC9.24□□□□□ -0.93
MACF1Q9UPN3 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
MACF1Q9UPN3 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
MACF1Q9UPN3 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
MACF1Q9UPN3 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
MACF1Q9UPN3 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC9.24□□□□□ -0.93
MACF1Q9UPN3 AP003097.1-201ENST00000530657 1135 ntBASIC9.24□□□□□ -0.93
MACF1Q9UPN3 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
MACF1Q9UPN3 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
MACF1Q9UPN3 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
MACF1Q9UPN3 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC9.23□□□□□ -0.93
MACF1Q9UPN3 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
MACF1Q9UPN3 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC9.23□□□□□ -0.93
MACF1Q9UPN3 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC9.23□□□□□ -0.93
MACF1Q9UPN3 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
MACF1Q9UPN3 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC9.23□□□□□ -0.93
MACF1Q9UPN3 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
MACF1Q9UPN3 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
MACF1Q9UPN3 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
MACF1Q9UPN3 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
MACF1Q9UPN3 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
MACF1Q9UPN3 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC9.23□□□□□ -0.93
MACF1Q9UPN3 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC9.23□□□□□ -0.93
MACF1Q9UPN3 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
MACF1Q9UPN3 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
MACF1Q9UPN3 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
MACF1Q9UPN3 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
MACF1Q9UPN3 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC9.23□□□□□ -0.93
MACF1Q9UPN3 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC9.22□□□□□ -0.93
MACF1Q9UPN3 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
MACF1Q9UPN3 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
MACF1Q9UPN3 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
MACF1Q9UPN3 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
MACF1Q9UPN3 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC9.22□□□□□ -0.93
MACF1Q9UPN3 AC012618.2-201ENST00000428058 849 ntBASIC9.22□□□□□ -0.93
MACF1Q9UPN3 SNX21-213ENST00000614929 587 ntTSL 5 BASIC9.22□□□□□ -0.93
MACF1Q9UPN3 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
MACF1Q9UPN3 FAM197Y4-202ENST00000622692 608 ntBASIC9.22□□□□□ -0.93
MACF1Q9UPN3 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
MACF1Q9UPN3 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC9.22□□□□□ -0.93
MACF1Q9UPN3 SPIB-206ENST00000596074 847 ntTSL 2 BASIC9.22□□□□□ -0.93
MACF1Q9UPN3 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC9.22□□□□□ -0.93
MACF1Q9UPN3 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
MACF1Q9UPN3 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC9.22□□□□□ -0.93
MACF1Q9UPN3 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC9.22□□□□□ -0.93
MACF1Q9UPN3 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
MACF1Q9UPN3 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
MACF1Q9UPN3 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC9.22□□□□□ -0.93
MACF1Q9UPN3 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
MACF1Q9UPN3 AC113347.1-201ENST00000413321 391 ntBASIC9.22□□□□□ -0.93
MACF1Q9UPN3 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC9.22□□□□□ -0.93
MACF1Q9UPN3 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC9.22□□□□□ -0.93
MACF1Q9UPN3 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC9.22□□□□□ -0.93
MACF1Q9UPN3 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
MACF1Q9UPN3 AC133637.1-201ENST00000624115 1537 ntBASIC9.22□□□□□ -0.93
MACF1Q9UPN3 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
MACF1Q9UPN3 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
MACF1Q9UPN3 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
MACF1Q9UPN3 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
MACF1Q9UPN3 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.93
MACF1Q9UPN3 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC9.21□□□□□ -0.93
MACF1Q9UPN3 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
MACF1Q9UPN3 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC9.21□□□□□ -0.93
MACF1Q9UPN3 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
MACF1Q9UPN3 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
MACF1Q9UPN3 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC9.21□□□□□ -0.94
MACF1Q9UPN3 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
MACF1Q9UPN3 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
MACF1Q9UPN3 BX276092.2-201ENST00000417668 665 ntBASIC9.21□□□□□ -0.94
MACF1Q9UPN3 AC087499.1-201ENST00000418141 1075 ntBASIC9.21□□□□□ -0.94
MACF1Q9UPN3 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
MACF1Q9UPN3 MIR4785-201ENST00000585005 73 ntBASIC9.21□□□□□ -0.94
MACF1Q9UPN3 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC9.21□□□□□ -0.94
MACF1Q9UPN3 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.94
MACF1Q9UPN3 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC9.21□□□□□ -0.94
MACF1Q9UPN3 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC9.21□□□□□ -0.94
MACF1Q9UPN3 KRT87P-202ENST00000534226 1464 ntBASIC9.21□□□□□ -0.94
MACF1Q9UPN3 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
MACF1Q9UPN3 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
MACF1Q9UPN3 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC9.21□□□□□ -0.94
MACF1Q9UPN3 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
MACF1Q9UPN3 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
MACF1Q9UPN3 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC9.2□□□□□ -0.94
MACF1Q9UPN3 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC9.2□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms