Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC23.2■■□□□ 1.3
PCDHGC3Q9UN70 AL136162.1-201ENST00000607711 1078 ntBASIC23.2■■□□□ 1.3
PCDHGC3Q9UN70 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHGC3Q9UN70 AC080038.3-201ENST00000623346 1952 ntBASIC23.2■■□□□ 1.3
PCDHGC3Q9UN70 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHGC3Q9UN70 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC23.19■■□□□ 1.3
PCDHGC3Q9UN70 EI24-211ENST00000534546 1544 ntTSL 2 BASIC23.19■■□□□ 1.3
PCDHGC3Q9UN70 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHGC3Q9UN70 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHGC3Q9UN70 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
PCDHGC3Q9UN70 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHGC3Q9UN70 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHGC3Q9UN70 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC23.19■■□□□ 1.3
PCDHGC3Q9UN70 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC23.19■■□□□ 1.3
PCDHGC3Q9UN70 AC024257.2-201ENST00000549699 147 ntBASIC23.19■■□□□ 1.3
PCDHGC3Q9UN70 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC23.19■■□□□ 1.3
PCDHGC3Q9UN70 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC23.19■■□□□ 1.3
PCDHGC3Q9UN70 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHGC3Q9UN70 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHGC3Q9UN70 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHGC3Q9UN70 USP45-205ENST00000472914 1617 ntTSL 5 BASIC23.19■■□□□ 1.3
PCDHGC3Q9UN70 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHGC3Q9UN70 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHGC3Q9UN70 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHGC3Q9UN70 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC23.18■■□□□ 1.3
PCDHGC3Q9UN70 AC096631.2-201ENST00000436136 790 ntBASIC23.18■■□□□ 1.3
PCDHGC3Q9UN70 RBM38-205ENST00000440234 686 ntTSL 2 BASIC23.18■■□□□ 1.3
PCDHGC3Q9UN70 SLC47A1P1-202ENST00000449666 945 ntBASIC23.18■■□□□ 1.3
PCDHGC3Q9UN70 MIR4767-201ENST00000582827 78 ntBASIC23.18■■□□□ 1.3
PCDHGC3Q9UN70 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
PCDHGC3Q9UN70 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHGC3Q9UN70 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC23.18■■□□□ 1.3
PCDHGC3Q9UN70 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHGC3Q9UN70 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC23.17■■□□□ 1.3
PCDHGC3Q9UN70 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHGC3Q9UN70 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHGC3Q9UN70 AC135279.3-201ENST00000610945 1311 ntBASIC23.17■■□□□ 1.3
PCDHGC3Q9UN70 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHGC3Q9UN70 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHGC3Q9UN70 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC23.17■■□□□ 1.3
PCDHGC3Q9UN70 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
PCDHGC3Q9UN70 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC23.17■■□□□ 1.3
PCDHGC3Q9UN70 AC139530.1-201ENST00000575312 1977 ntBASIC23.17■■□□□ 1.3
PCDHGC3Q9UN70 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHGC3Q9UN70 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHGC3Q9UN70 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC23.17■■□□□ 1.3
PCDHGC3Q9UN70 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
PCDHGC3Q9UN70 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHGC3Q9UN70 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHGC3Q9UN70 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHGC3Q9UN70 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHGC3Q9UN70 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC23.16■■□□□ 1.3
PCDHGC3Q9UN70 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHGC3Q9UN70 LSR-203ENST00000360798 1963 ntTSL 2 BASIC23.16■■□□□ 1.3
PCDHGC3Q9UN70 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHGC3Q9UN70 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHGC3Q9UN70 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHGC3Q9UN70 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC23.15■■□□□ 1.3
PCDHGC3Q9UN70 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHGC3Q9UN70 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHGC3Q9UN70 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHGC3Q9UN70 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC23.15■■□□□ 1.3
PCDHGC3Q9UN70 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC23.15■■□□□ 1.3
PCDHGC3Q9UN70 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC23.15■■□□□ 1.3
PCDHGC3Q9UN70 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC23.15■■□□□ 1.3
PCDHGC3Q9UN70 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHGC3Q9UN70 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
PCDHGC3Q9UN70 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHGC3Q9UN70 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
PCDHGC3Q9UN70 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.3
PCDHGC3Q9UN70 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.3
PCDHGC3Q9UN70 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
PCDHGC3Q9UN70 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHGC3Q9UN70 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHGC3Q9UN70 LINC00526-201ENST00000581067 1875 ntBASIC23.14■■□□□ 1.29
PCDHGC3Q9UN70 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHGC3Q9UN70 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC23.14■■□□□ 1.29
PCDHGC3Q9UN70 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.29
PCDHGC3Q9UN70 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHGC3Q9UN70 AC106739.1-201ENST00000617035 715 ntBASIC23.14■■□□□ 1.29
PCDHGC3Q9UN70 AC110285.6-201ENST00000617652 491 ntBASIC23.14■■□□□ 1.29
PCDHGC3Q9UN70 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHGC3Q9UN70 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHGC3Q9UN70 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHGC3Q9UN70 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC23.13■■□□□ 1.29
PCDHGC3Q9UN70 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHGC3Q9UN70 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHGC3Q9UN70 BX842568.3-201ENST00000418104 571 ntBASIC23.13■■□□□ 1.29
PCDHGC3Q9UN70 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC23.13■■□□□ 1.29
PCDHGC3Q9UN70 AP005435.1-201ENST00000529293 1178 ntBASIC23.13■■□□□ 1.29
PCDHGC3Q9UN70 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHGC3Q9UN70 AC079834.2-201ENST00000609776 1949 ntBASIC23.13■■□□□ 1.29
PCDHGC3Q9UN70 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC23.13■■□□□ 1.29
PCDHGC3Q9UN70 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHGC3Q9UN70 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC23.12■■□□□ 1.29
PCDHGC3Q9UN70 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHGC3Q9UN70 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHGC3Q9UN70 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHGC3Q9UN70 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHGC3Q9UN70 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms