Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
RNF216Q9NWF9 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
RNF216Q9NWF9 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
RNF216Q9NWF9 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RNF216Q9NWF9 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RNF216Q9NWF9 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC24.63■■□□□ 1.53
RNF216Q9NWF9 PARL-206ENST00000435888 1098 ntTSL 5 BASIC24.63■■□□□ 1.53
RNF216Q9NWF9 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
RNF216Q9NWF9 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC24.63■■□□□ 1.53
RNF216Q9NWF9 MIR3181-201ENST00000578512 73 ntBASIC24.63■■□□□ 1.53
RNF216Q9NWF9 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
RNF216Q9NWF9 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
RNF216Q9NWF9 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
RNF216Q9NWF9 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RNF216Q9NWF9 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RNF216Q9NWF9 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC24.62■■□□□ 1.53
RNF216Q9NWF9 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RNF216Q9NWF9 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
RNF216Q9NWF9 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
RNF216Q9NWF9 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
RNF216Q9NWF9 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
RNF216Q9NWF9 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC24.62■■□□□ 1.53
RNF216Q9NWF9 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
RNF216Q9NWF9 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC24.62■■□□□ 1.53
RNF216Q9NWF9 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RNF216Q9NWF9 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
RNF216Q9NWF9 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC24.62■■□□□ 1.53
RNF216Q9NWF9 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RNF216Q9NWF9 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC24.61■■□□□ 1.53
RNF216Q9NWF9 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
RNF216Q9NWF9 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC24.61■■□□□ 1.53
RNF216Q9NWF9 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
RNF216Q9NWF9 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RNF216Q9NWF9 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
RNF216Q9NWF9 UPF3AP2-201ENST00000457924 1132 ntBASIC24.61■■□□□ 1.53
RNF216Q9NWF9 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC24.61■■□□□ 1.53
RNF216Q9NWF9 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC24.61■■□□□ 1.53
RNF216Q9NWF9 AC008147.4-201ENST00000617570 1204 ntBASIC24.61■■□□□ 1.53
RNF216Q9NWF9 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC24.61■■□□□ 1.53
RNF216Q9NWF9 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
RNF216Q9NWF9 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC24.61■■□□□ 1.53
RNF216Q9NWF9 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
RNF216Q9NWF9 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC24.6■■□□□ 1.53
RNF216Q9NWF9 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
RNF216Q9NWF9 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC24.6■■□□□ 1.53
RNF216Q9NWF9 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC24.6■■□□□ 1.53
RNF216Q9NWF9 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC24.6■■□□□ 1.53
RNF216Q9NWF9 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC24.6■■□□□ 1.53
RNF216Q9NWF9 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
RNF216Q9NWF9 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
RNF216Q9NWF9 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
RNF216Q9NWF9 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
RNF216Q9NWF9 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC24.59■■□□□ 1.53
RNF216Q9NWF9 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
RNF216Q9NWF9 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC24.59■■□□□ 1.53
RNF216Q9NWF9 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RNF216Q9NWF9 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
RNF216Q9NWF9 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
RNF216Q9NWF9 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC24.59■■□□□ 1.53
RNF216Q9NWF9 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC24.59■■□□□ 1.53
RNF216Q9NWF9 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC24.59■■□□□ 1.53
RNF216Q9NWF9 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC24.59■■□□□ 1.53
RNF216Q9NWF9 NFE2L3P1-201ENST00000588207 1959 ntBASIC24.59■■□□□ 1.53
RNF216Q9NWF9 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC24.59■■□□□ 1.53
RNF216Q9NWF9 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
RNF216Q9NWF9 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RNF216Q9NWF9 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC24.58■■□□□ 1.53
RNF216Q9NWF9 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
RNF216Q9NWF9 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC24.58■■□□□ 1.53
RNF216Q9NWF9 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
RNF216Q9NWF9 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC24.58■■□□□ 1.53
RNF216Q9NWF9 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC24.58■■□□□ 1.53
RNF216Q9NWF9 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC24.58■■□□□ 1.53
RNF216Q9NWF9 NKILA-201ENST00000613231 537 ntTSL 4 BASIC24.58■■□□□ 1.53
RNF216Q9NWF9 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.53
RNF216Q9NWF9 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC24.58■■□□□ 1.52
RNF216Q9NWF9 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.52
RNF216Q9NWF9 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC24.58■■□□□ 1.52
RNF216Q9NWF9 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RNF216Q9NWF9 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
RNF216Q9NWF9 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
RNF216Q9NWF9 ALDH1A3-203ENST00000557963 1670 ntBASIC24.57■■□□□ 1.52
RNF216Q9NWF9 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
RNF216Q9NWF9 AK1-201ENST00000223836 736 ntTSL 3 BASIC24.57■■□□□ 1.52
RNF216Q9NWF9 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
RNF216Q9NWF9 MTND2P25-201ENST00000449028 610 ntBASIC24.57■■□□□ 1.52
RNF216Q9NWF9 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC24.57■■□□□ 1.52
RNF216Q9NWF9 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC24.57■■□□□ 1.52
RNF216Q9NWF9 RHOF-204ENST00000537265 699 ntTSL 2 BASIC24.57■■□□□ 1.52
RNF216Q9NWF9 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
RNF216Q9NWF9 RN7SL371P-201ENST00000578099 267 ntBASIC24.57■■□□□ 1.52
RNF216Q9NWF9 ANKRD20A6P-201ENST00000618763 204 ntBASIC24.57■■□□□ 1.52
RNF216Q9NWF9 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC24.57■■□□□ 1.52
RNF216Q9NWF9 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
RNF216Q9NWF9 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RNF216Q9NWF9 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC24.56■■□□□ 1.52
RNF216Q9NWF9 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC24.56■■□□□ 1.52
RNF216Q9NWF9 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC24.56■■□□□ 1.52
RNF216Q9NWF9 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC24.56■■□□□ 1.52
RNF216Q9NWF9 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms