Protein–RNA interactions for Protein: Q9H2W1

MS4A6A, Membrane-spanning 4-domains subfamily A member 6A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6AQ9H2W1 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MS4A6AQ9H2W1 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
MS4A6AQ9H2W1 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MS4A6AQ9H2W1 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC16.78■□□□□ 0.28
MS4A6AQ9H2W1 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
MS4A6AQ9H2W1 VGF-203ENST00000611537 1622 ntTSL 5 BASIC16.78■□□□□ 0.28
MS4A6AQ9H2W1 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MS4A6AQ9H2W1 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MS4A6AQ9H2W1 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MS4A6AQ9H2W1 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
MS4A6AQ9H2W1 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC16.78■□□□□ 0.28
MS4A6AQ9H2W1 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC16.78■□□□□ 0.28
MS4A6AQ9H2W1 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MS4A6AQ9H2W1 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC16.78■□□□□ 0.28
MS4A6AQ9H2W1 RPP21-222ENST00000433076 577 ntTSL 2 BASIC16.78■□□□□ 0.28
MS4A6AQ9H2W1 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC16.78■□□□□ 0.28
MS4A6AQ9H2W1 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC16.78■□□□□ 0.28
MS4A6AQ9H2W1 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC16.78■□□□□ 0.28
MS4A6AQ9H2W1 DUX4L4-201ENST00000566884 1269 ntBASIC16.78■□□□□ 0.28
MS4A6AQ9H2W1 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC16.78■□□□□ 0.28
MS4A6AQ9H2W1 TRIR-202ENST00000588213 841 ntTSL 3 BASIC16.78■□□□□ 0.28
MS4A6AQ9H2W1 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MS4A6AQ9H2W1 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MS4A6AQ9H2W1 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC16.78■□□□□ 0.28
MS4A6AQ9H2W1 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MS4A6AQ9H2W1 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
MS4A6AQ9H2W1 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
MS4A6AQ9H2W1 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
MS4A6AQ9H2W1 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
MS4A6AQ9H2W1 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC16.77■□□□□ 0.28
MS4A6AQ9H2W1 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
MS4A6AQ9H2W1 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC16.77■□□□□ 0.28
MS4A6AQ9H2W1 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC16.77■□□□□ 0.28
MS4A6AQ9H2W1 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC16.77■□□□□ 0.28
MS4A6AQ9H2W1 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC16.77■□□□□ 0.28
MS4A6AQ9H2W1 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
MS4A6AQ9H2W1 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
MS4A6AQ9H2W1 RASSF1-AS1-201ENST00000629828 790 ntBASIC16.77■□□□□ 0.28
MS4A6AQ9H2W1 AC007375.3-201ENST00000600936 2314 ntBASIC16.77■□□□□ 0.28
MS4A6AQ9H2W1 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
MS4A6AQ9H2W1 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC16.77■□□□□ 0.27
MS4A6AQ9H2W1 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
MS4A6AQ9H2W1 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC16.77■□□□□ 0.27
MS4A6AQ9H2W1 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC16.76■□□□□ 0.27
MS4A6AQ9H2W1 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC16.76■□□□□ 0.27
MS4A6AQ9H2W1 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
MS4A6AQ9H2W1 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC16.76■□□□□ 0.27
MS4A6AQ9H2W1 SRD5A1P1-201ENST00000442297 786 ntBASIC16.76■□□□□ 0.27
MS4A6AQ9H2W1 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC16.76■□□□□ 0.27
MS4A6AQ9H2W1 AL512631.2-201ENST00000604634 923 ntBASIC16.76■□□□□ 0.27
MS4A6AQ9H2W1 AC131212.1-201ENST00000613771 668 ntBASIC16.76■□□□□ 0.27
MS4A6AQ9H2W1 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC16.76■□□□□ 0.27
MS4A6AQ9H2W1 AC241377.3-202ENST00000626088 1088 ntBASIC16.76■□□□□ 0.27
MS4A6AQ9H2W1 AC241585.3-202ENST00000628937 1088 ntBASIC16.76■□□□□ 0.27
MS4A6AQ9H2W1 AC245100.8-202ENST00000629247 1058 ntBASIC16.76■□□□□ 0.27
MS4A6AQ9H2W1 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MS4A6AQ9H2W1 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
MS4A6AQ9H2W1 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
MS4A6AQ9H2W1 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MS4A6AQ9H2W1 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
MS4A6AQ9H2W1 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MS4A6AQ9H2W1 MYB-221ENST00000527615 2381 ntTSL 5 BASIC16.75■□□□□ 0.27
MS4A6AQ9H2W1 GATM-206ENST00000558336 1522 ntTSL 2 BASIC16.75■□□□□ 0.27
MS4A6AQ9H2W1 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
MS4A6AQ9H2W1 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC16.75■□□□□ 0.27
MS4A6AQ9H2W1 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC16.75■□□□□ 0.27
MS4A6AQ9H2W1 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MS4A6AQ9H2W1 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
MS4A6AQ9H2W1 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC16.75■□□□□ 0.27
MS4A6AQ9H2W1 QDPR-206ENST00000508623 601 ntTSL 3 BASIC16.75■□□□□ 0.27
MS4A6AQ9H2W1 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC16.75■□□□□ 0.27
MS4A6AQ9H2W1 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC16.75■□□□□ 0.27
MS4A6AQ9H2W1 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC16.75■□□□□ 0.27
MS4A6AQ9H2W1 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC16.75■□□□□ 0.27
MS4A6AQ9H2W1 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MS4A6AQ9H2W1 WWC2-AS2-201ENST00000578387 2183 ntBASIC16.75■□□□□ 0.27
MS4A6AQ9H2W1 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
MS4A6AQ9H2W1 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MS4A6AQ9H2W1 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
MS4A6AQ9H2W1 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
MS4A6AQ9H2W1 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC16.75■□□□□ 0.27
MS4A6AQ9H2W1 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
MS4A6AQ9H2W1 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MS4A6AQ9H2W1 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC16.74■□□□□ 0.27
MS4A6AQ9H2W1 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC16.74■□□□□ 0.27
MS4A6AQ9H2W1 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MS4A6AQ9H2W1 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MS4A6AQ9H2W1 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
MS4A6AQ9H2W1 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
MS4A6AQ9H2W1 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MS4A6AQ9H2W1 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MS4A6AQ9H2W1 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
MS4A6AQ9H2W1 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MS4A6AQ9H2W1 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC16.74■□□□□ 0.27
MS4A6AQ9H2W1 AC009086.3-201ENST00000623486 1008 ntBASIC16.74■□□□□ 0.27
MS4A6AQ9H2W1 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
MS4A6AQ9H2W1 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
MS4A6AQ9H2W1 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC16.74■□□□□ 0.27
MS4A6AQ9H2W1 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC16.74■□□□□ 0.27
MS4A6AQ9H2W1 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms