Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
NEK1Q96PY6 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC25.97■■□□□ 1.75
NEK1Q96PY6 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC25.97■■□□□ 1.75
NEK1Q96PY6 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC25.97■■□□□ 1.75
NEK1Q96PY6 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
NEK1Q96PY6 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
NEK1Q96PY6 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
NEK1Q96PY6 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
NEK1Q96PY6 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
NEK1Q96PY6 AC139530.1-201ENST00000575312 1977 ntBASIC25.96■■□□□ 1.75
NEK1Q96PY6 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
NEK1Q96PY6 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
NEK1Q96PY6 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC25.96■■□□□ 1.75
NEK1Q96PY6 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC25.96■■□□□ 1.75
NEK1Q96PY6 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
NEK1Q96PY6 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
NEK1Q96PY6 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
NEK1Q96PY6 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC25.95■■□□□ 1.75
NEK1Q96PY6 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
NEK1Q96PY6 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
NEK1Q96PY6 AC137767.1-201ENST00000602918 1920 ntBASIC25.95■■□□□ 1.74
NEK1Q96PY6 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC25.95■■□□□ 1.74
NEK1Q96PY6 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
NEK1Q96PY6 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC25.95■■□□□ 1.74
NEK1Q96PY6 CA15P2-201ENST00000611168 834 ntBASIC25.95■■□□□ 1.74
NEK1Q96PY6 SF1-220ENST00000626028 704 ntTSL 2 BASIC25.95■■□□□ 1.74
NEK1Q96PY6 AL031602.1-201ENST00000633169 911 ntBASIC25.95■■□□□ 1.74
NEK1Q96PY6 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
NEK1Q96PY6 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
NEK1Q96PY6 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC25.95■■□□□ 1.74
NEK1Q96PY6 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
NEK1Q96PY6 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
NEK1Q96PY6 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
NEK1Q96PY6 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
NEK1Q96PY6 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
NEK1Q96PY6 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
NEK1Q96PY6 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC25.95■■□□□ 1.74
NEK1Q96PY6 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC25.94■■□□□ 1.74
NEK1Q96PY6 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
NEK1Q96PY6 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC25.94■■□□□ 1.74
NEK1Q96PY6 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC25.94■■□□□ 1.74
NEK1Q96PY6 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
NEK1Q96PY6 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
NEK1Q96PY6 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC25.94■■□□□ 1.74
NEK1Q96PY6 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
NEK1Q96PY6 OR2I1P-207ENST00000453522 948 ntBASIC25.94■■□□□ 1.74
NEK1Q96PY6 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC25.94■■□□□ 1.74
NEK1Q96PY6 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC25.94■■□□□ 1.74
NEK1Q96PY6 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
NEK1Q96PY6 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
NEK1Q96PY6 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
NEK1Q96PY6 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC25.93■■□□□ 1.74
NEK1Q96PY6 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
NEK1Q96PY6 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
NEK1Q96PY6 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
NEK1Q96PY6 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
NEK1Q96PY6 AC011298.3-201ENST00000615796 283 ntBASIC25.93■■□□□ 1.74
NEK1Q96PY6 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC25.93■■□□□ 1.74
NEK1Q96PY6 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
NEK1Q96PY6 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC25.93■■□□□ 1.74
NEK1Q96PY6 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC25.93■■□□□ 1.74
NEK1Q96PY6 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC25.93■■□□□ 1.74
NEK1Q96PY6 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC25.92■■□□□ 1.74
NEK1Q96PY6 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC25.92■■□□□ 1.74
NEK1Q96PY6 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
NEK1Q96PY6 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC25.92■■□□□ 1.74
NEK1Q96PY6 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC25.92■■□□□ 1.74
NEK1Q96PY6 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC25.92■■□□□ 1.74
NEK1Q96PY6 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
NEK1Q96PY6 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
NEK1Q96PY6 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
NEK1Q96PY6 STK25-234ENST00000535007 2459 ntTSL 2 BASIC25.92■■□□□ 1.74
NEK1Q96PY6 AC008406.3-201ENST00000620001 1374 ntBASIC25.92■■□□□ 1.74
NEK1Q96PY6 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
NEK1Q96PY6 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC25.92■■□□□ 1.74
NEK1Q96PY6 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC25.91■■□□□ 1.74
NEK1Q96PY6 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
NEK1Q96PY6 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC25.91■■□□□ 1.74
NEK1Q96PY6 AC010525.1-201ENST00000585559 441 ntBASIC25.91■■□□□ 1.74
NEK1Q96PY6 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC25.91■■□□□ 1.74
NEK1Q96PY6 AC136469.2-201ENST00000623944 1028 ntBASIC25.91■■□□□ 1.74
NEK1Q96PY6 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
NEK1Q96PY6 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
NEK1Q96PY6 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
NEK1Q96PY6 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
NEK1Q96PY6 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
NEK1Q96PY6 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC25.9■■□□□ 1.74
NEK1Q96PY6 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC25.9■■□□□ 1.74
NEK1Q96PY6 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
NEK1Q96PY6 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC25.9■■□□□ 1.74
NEK1Q96PY6 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC25.9■■□□□ 1.74
NEK1Q96PY6 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC25.9■■□□□ 1.74
NEK1Q96PY6 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
NEK1Q96PY6 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC25.9■■□□□ 1.74
NEK1Q96PY6 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
NEK1Q96PY6 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
NEK1Q96PY6 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
NEK1Q96PY6 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC25.9■■□□□ 1.74
NEK1Q96PY6 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
NEK1Q96PY6 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC25.9■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms