Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 AF131216.4-201ENST00000638924 1588 ntBASIC16.69■□□□□ 0.26
LINC00479Q96M42 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LINC00479Q96M42 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
LINC00479Q96M42 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LINC00479Q96M42 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC16.69■□□□□ 0.26
LINC00479Q96M42 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LINC00479Q96M42 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LINC00479Q96M42 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
LINC00479Q96M42 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LINC00479Q96M42 AC144652.1-201ENST00000609974 1624 ntBASIC16.69■□□□□ 0.26
LINC00479Q96M42 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LINC00479Q96M42 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LINC00479Q96M42 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LINC00479Q96M42 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LINC00479Q96M42 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LINC00479Q96M42 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC16.68■□□□□ 0.26
LINC00479Q96M42 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
LINC00479Q96M42 AC004448.1-201ENST00000458332 883 ntBASIC16.68■□□□□ 0.26
LINC00479Q96M42 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC16.68■□□□□ 0.26
LINC00479Q96M42 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LINC00479Q96M42 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LINC00479Q96M42 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LINC00479Q96M42 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
LINC00479Q96M42 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LINC00479Q96M42 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LINC00479Q96M42 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LINC00479Q96M42 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC16.68■□□□□ 0.26
LINC00479Q96M42 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC16.68■□□□□ 0.26
LINC00479Q96M42 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC16.68■□□□□ 0.26
LINC00479Q96M42 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
LINC00479Q96M42 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LINC00479Q96M42 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LINC00479Q96M42 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
LINC00479Q96M42 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
LINC00479Q96M42 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LINC00479Q96M42 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC16.67■□□□□ 0.26
LINC00479Q96M42 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC16.67■□□□□ 0.26
LINC00479Q96M42 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LINC00479Q96M42 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LINC00479Q96M42 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LINC00479Q96M42 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC16.66■□□□□ 0.26
LINC00479Q96M42 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC16.66■□□□□ 0.26
LINC00479Q96M42 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
LINC00479Q96M42 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LINC00479Q96M42 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LINC00479Q96M42 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LINC00479Q96M42 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
LINC00479Q96M42 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC16.66■□□□□ 0.26
LINC00479Q96M42 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LINC00479Q96M42 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LINC00479Q96M42 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
LINC00479Q96M42 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
LINC00479Q96M42 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC16.66■□□□□ 0.26
LINC00479Q96M42 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LINC00479Q96M42 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC16.66■□□□□ 0.26
LINC00479Q96M42 AC022616.5-201ENST00000518796 181 ntBASIC16.66■□□□□ 0.26
LINC00479Q96M42 AC120024.1-201ENST00000562672 995 ntBASIC16.66■□□□□ 0.26
LINC00479Q96M42 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
LINC00479Q96M42 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
LINC00479Q96M42 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LINC00479Q96M42 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LINC00479Q96M42 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
LINC00479Q96M42 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
LINC00479Q96M42 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LINC00479Q96M42 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LINC00479Q96M42 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LINC00479Q96M42 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
LINC00479Q96M42 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LINC00479Q96M42 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC16.65■□□□□ 0.26
LINC00479Q96M42 AC129492.7-201ENST00000622992 756 ntBASIC16.65■□□□□ 0.26
LINC00479Q96M42 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LINC00479Q96M42 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
LINC00479Q96M42 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LINC00479Q96M42 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LINC00479Q96M42 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LINC00479Q96M42 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
LINC00479Q96M42 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC16.65■□□□□ 0.26
LINC00479Q96M42 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
LINC00479Q96M42 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
LINC00479Q96M42 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LINC00479Q96M42 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
LINC00479Q96M42 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
LINC00479Q96M42 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LINC00479Q96M42 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
LINC00479Q96M42 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LINC00479Q96M42 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LINC00479Q96M42 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LINC00479Q96M42 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LINC00479Q96M42 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LINC00479Q96M42 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LINC00479Q96M42 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LINC00479Q96M42 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
LINC00479Q96M42 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
LINC00479Q96M42 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
LINC00479Q96M42 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LINC00479Q96M42 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
LINC00479Q96M42 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LINC00479Q96M42 ME2-206ENST00000638410 2289 ntTSL 5 BASIC16.63■□□□□ 0.25
LINC00479Q96M42 ME2-210ENST00000639255 2262 ntTSL 5 BASIC16.63■□□□□ 0.25
LINC00479Q96M42 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms