Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM54Q969K7 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.35■□□□□ 0.69
TMEM54Q969K7 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.35■□□□□ 0.69
TMEM54Q969K7 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM54Q969K7 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TMEM54Q969K7 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM54Q969K7 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM54Q969K7 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM54Q969K7 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
TMEM54Q969K7 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM54Q969K7 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM54Q969K7 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM54Q969K7 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM54Q969K7 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.34■□□□□ 0.69
TMEM54Q969K7 AC096631.2-201ENST00000436136 790 ntBASIC19.34■□□□□ 0.69
TMEM54Q969K7 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.34■□□□□ 0.69
TMEM54Q969K7 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.34■□□□□ 0.69
TMEM54Q969K7 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM54Q969K7 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM54Q969K7 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM54Q969K7 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
TMEM54Q969K7 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM54Q969K7 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM54Q969K7 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM54Q969K7 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM54Q969K7 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM54Q969K7 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TMEM54Q969K7 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TMEM54Q969K7 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
TMEM54Q969K7 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TMEM54Q969K7 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
TMEM54Q969K7 AC137767.1-201ENST00000602918 1920 ntBASIC19.33■□□□□ 0.69
TMEM54Q969K7 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.33■□□□□ 0.69
TMEM54Q969K7 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TMEM54Q969K7 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.33■□□□□ 0.68
TMEM54Q969K7 SLC47A1P1-202ENST00000449666 945 ntBASIC19.33■□□□□ 0.68
TMEM54Q969K7 MIR4767-201ENST00000582827 78 ntBASIC19.33■□□□□ 0.68
TMEM54Q969K7 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.33■□□□□ 0.68
TMEM54Q969K7 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.33■□□□□ 0.68
TMEM54Q969K7 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
TMEM54Q969K7 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
TMEM54Q969K7 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TMEM54Q969K7 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
TMEM54Q969K7 AC080038.3-201ENST00000623346 1952 ntBASIC19.33■□□□□ 0.68
TMEM54Q969K7 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TMEM54Q969K7 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TMEM54Q969K7 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM54Q969K7 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM54Q969K7 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM54Q969K7 AC135279.3-201ENST00000610945 1311 ntBASIC19.32■□□□□ 0.68
TMEM54Q969K7 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM54Q969K7 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM54Q969K7 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM54Q969K7 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TMEM54Q969K7 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.32■□□□□ 0.68
TMEM54Q969K7 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.32■□□□□ 0.68
TMEM54Q969K7 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
TMEM54Q969K7 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
TMEM54Q969K7 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.31■□□□□ 0.68
TMEM54Q969K7 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM54Q969K7 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM54Q969K7 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM54Q969K7 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.31■□□□□ 0.68
TMEM54Q969K7 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.31■□□□□ 0.68
TMEM54Q969K7 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.31■□□□□ 0.68
TMEM54Q969K7 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
TMEM54Q969K7 AC139530.1-201ENST00000575312 1977 ntBASIC19.31■□□□□ 0.68
TMEM54Q969K7 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TMEM54Q969K7 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM54Q969K7 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM54Q969K7 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
TMEM54Q969K7 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM54Q969K7 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM54Q969K7 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
TMEM54Q969K7 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM54Q969K7 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
TMEM54Q969K7 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM54Q969K7 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
TMEM54Q969K7 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM54Q969K7 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.3■□□□□ 0.68
TMEM54Q969K7 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
TMEM54Q969K7 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TMEM54Q969K7 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM54Q969K7 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.29■□□□□ 0.68
TMEM54Q969K7 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM54Q969K7 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
TMEM54Q969K7 LINC00526-201ENST00000581067 1875 ntBASIC19.29■□□□□ 0.68
TMEM54Q969K7 BX842568.3-201ENST00000418104 571 ntBASIC19.29■□□□□ 0.68
TMEM54Q969K7 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.29■□□□□ 0.68
TMEM54Q969K7 PBX2P1-201ENST00000493219 1291 ntBASIC19.29■□□□□ 0.68
TMEM54Q969K7 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.29■□□□□ 0.68
TMEM54Q969K7 AP005435.1-201ENST00000529293 1178 ntBASIC19.29■□□□□ 0.68
TMEM54Q969K7 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.29■□□□□ 0.68
TMEM54Q969K7 AC106739.1-201ENST00000617035 715 ntBASIC19.29■□□□□ 0.68
TMEM54Q969K7 AC110285.6-201ENST00000617652 491 ntBASIC19.29■□□□□ 0.68
TMEM54Q969K7 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM54Q969K7 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM54Q969K7 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TMEM54Q969K7 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TMEM54Q969K7 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms