Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
AP3S1Q92572 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.28■□□□□ 0.68
AP3S1Q92572 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
AP3S1Q92572 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
AP3S1Q92572 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
AP3S1Q92572 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
AP3S1Q92572 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
AP3S1Q92572 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
AP3S1Q92572 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.27■□□□□ 0.68
AP3S1Q92572 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
AP3S1Q92572 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.27■□□□□ 0.68
AP3S1Q92572 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
AP3S1Q92572 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
AP3S1Q92572 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
AP3S1Q92572 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
AP3S1Q92572 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC19.27■□□□□ 0.68
AP3S1Q92572 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
AP3S1Q92572 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.27■□□□□ 0.68
AP3S1Q92572 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
AP3S1Q92572 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.67
AP3S1Q92572 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
AP3S1Q92572 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
AP3S1Q92572 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
AP3S1Q92572 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
AP3S1Q92572 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
AP3S1Q92572 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
AP3S1Q92572 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
AP3S1Q92572 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
AP3S1Q92572 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
AP3S1Q92572 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
AP3S1Q92572 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
AP3S1Q92572 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
AP3S1Q92572 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.26■□□□□ 0.67
AP3S1Q92572 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
AP3S1Q92572 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
AP3S1Q92572 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
AP3S1Q92572 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
AP3S1Q92572 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
AP3S1Q92572 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
AP3S1Q92572 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.25■□□□□ 0.67
AP3S1Q92572 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
AP3S1Q92572 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
AP3S1Q92572 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
AP3S1Q92572 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
AP3S1Q92572 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.25■□□□□ 0.67
AP3S1Q92572 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.25■□□□□ 0.67
AP3S1Q92572 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.24■□□□□ 0.67
AP3S1Q92572 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
AP3S1Q92572 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
AP3S1Q92572 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
AP3S1Q92572 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
AP3S1Q92572 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC19.24■□□□□ 0.67
AP3S1Q92572 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
AP3S1Q92572 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
AP3S1Q92572 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
AP3S1Q92572 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.23■□□□□ 0.67
AP3S1Q92572 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
AP3S1Q92572 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
AP3S1Q92572 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
AP3S1Q92572 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
AP3S1Q92572 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.23■□□□□ 0.67
AP3S1Q92572 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.23■□□□□ 0.67
AP3S1Q92572 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
AP3S1Q92572 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.23■□□□□ 0.67
AP3S1Q92572 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
AP3S1Q92572 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
AP3S1Q92572 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
AP3S1Q92572 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
AP3S1Q92572 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
AP3S1Q92572 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
AP3S1Q92572 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
AP3S1Q92572 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
AP3S1Q92572 ZNRF2P2-203ENST00000454624 420 ntBASIC19.22■□□□□ 0.67
AP3S1Q92572 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC19.22■□□□□ 0.67
AP3S1Q92572 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
AP3S1Q92572 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.22■□□□□ 0.67
AP3S1Q92572 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
AP3S1Q92572 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
AP3S1Q92572 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
AP3S1Q92572 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
AP3S1Q92572 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
AP3S1Q92572 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
AP3S1Q92572 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.21■□□□□ 0.67
AP3S1Q92572 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
AP3S1Q92572 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
AP3S1Q92572 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
AP3S1Q92572 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
AP3S1Q92572 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.21■□□□□ 0.67
AP3S1Q92572 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
AP3S1Q92572 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
AP3S1Q92572 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
AP3S1Q92572 RPS2P7-201ENST00000447334 885 ntBASIC19.21■□□□□ 0.67
AP3S1Q92572 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.21■□□□□ 0.67
AP3S1Q92572 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.21■□□□□ 0.67
AP3S1Q92572 GDI1-215ENST00000630693 786 ntTSL 4 BASIC19.21■□□□□ 0.67
AP3S1Q92572 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
AP3S1Q92572 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.21■□□□□ 0.67
AP3S1Q92572 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
AP3S1Q92572 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
AP3S1Q92572 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms