Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC9.13□□□□□ -0.95
SYNE2Q8WXH0 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC9.13□□□□□ -0.95
SYNE2Q8WXH0 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC9.13□□□□□ -0.95
SYNE2Q8WXH0 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
SYNE2Q8WXH0 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC9.13□□□□□ -0.95
SYNE2Q8WXH0 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SYNE2Q8WXH0 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SYNE2Q8WXH0 AL353708.3-201ENST00000610272 989 ntBASIC9.13□□□□□ -0.95
SYNE2Q8WXH0 SNX21-213ENST00000614929 587 ntTSL 5 BASIC9.13□□□□□ -0.95
SYNE2Q8WXH0 MIR6786-201ENST00000616843 113 ntBASIC9.13□□□□□ -0.95
SYNE2Q8WXH0 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC9.13□□□□□ -0.95
SYNE2Q8WXH0 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC9.13□□□□□ -0.95
SYNE2Q8WXH0 AC079140.4-201ENST00000507448 529 ntBASIC9.13□□□□□ -0.95
SYNE2Q8WXH0 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC9.13□□□□□ -0.95
SYNE2Q8WXH0 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SYNE2Q8WXH0 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC9.12□□□□□ -0.95
SYNE2Q8WXH0 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
SYNE2Q8WXH0 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC9.12□□□□□ -0.95
SYNE2Q8WXH0 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SYNE2Q8WXH0 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SYNE2Q8WXH0 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SYNE2Q8WXH0 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
SYNE2Q8WXH0 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
SYNE2Q8WXH0 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
SYNE2Q8WXH0 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC9.12□□□□□ -0.95
SYNE2Q8WXH0 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SYNE2Q8WXH0 NKILA-201ENST00000613231 537 ntTSL 4 BASIC9.12□□□□□ -0.95
SYNE2Q8WXH0 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
SYNE2Q8WXH0 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC9.12□□□□□ -0.95
SYNE2Q8WXH0 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
SYNE2Q8WXH0 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC9.12□□□□□ -0.95
SYNE2Q8WXH0 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SYNE2Q8WXH0 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SYNE2Q8WXH0 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
SYNE2Q8WXH0 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC9.12□□□□□ -0.95
SYNE2Q8WXH0 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC9.12□□□□□ -0.95
SYNE2Q8WXH0 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC9.12□□□□□ -0.95
SYNE2Q8WXH0 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
SYNE2Q8WXH0 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SYNE2Q8WXH0 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
SYNE2Q8WXH0 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
SYNE2Q8WXH0 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
SYNE2Q8WXH0 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC9.12□□□□□ -0.95
SYNE2Q8WXH0 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
SYNE2Q8WXH0 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC9.12□□□□□ -0.95
SYNE2Q8WXH0 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
SYNE2Q8WXH0 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
SYNE2Q8WXH0 P4HB-223ENST00000576390 439 ntTSL 4 BASIC9.12□□□□□ -0.95
SYNE2Q8WXH0 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC9.12□□□□□ -0.95
SYNE2Q8WXH0 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
SYNE2Q8WXH0 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC9.11□□□□□ -0.95
SYNE2Q8WXH0 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SYNE2Q8WXH0 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SYNE2Q8WXH0 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC9.11□□□□□ -0.95
SYNE2Q8WXH0 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
SYNE2Q8WXH0 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SYNE2Q8WXH0 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
SYNE2Q8WXH0 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
SYNE2Q8WXH0 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC9.11□□□□□ -0.95
SYNE2Q8WXH0 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC9.11□□□□□ -0.95
SYNE2Q8WXH0 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC9.11□□□□□ -0.95
SYNE2Q8WXH0 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC9.11□□□□□ -0.95
SYNE2Q8WXH0 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
SYNE2Q8WXH0 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
SYNE2Q8WXH0 AC012618.2-201ENST00000428058 849 ntBASIC9.11□□□□□ -0.95
SYNE2Q8WXH0 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC9.11□□□□□ -0.95
SYNE2Q8WXH0 AC008694.1-202ENST00000636953 945 ntBASIC9.11□□□□□ -0.95
SYNE2Q8WXH0 BX005040.4-201ENST00000637145 1518 ntBASIC9.11□□□□□ -0.95
SYNE2Q8WXH0 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC9.11□□□□□ -0.95
SYNE2Q8WXH0 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC9.11□□□□□ -0.95
SYNE2Q8WXH0 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
SYNE2Q8WXH0 BX276092.2-201ENST00000417668 665 ntBASIC9.11□□□□□ -0.95
SYNE2Q8WXH0 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC9.11□□□□□ -0.95
SYNE2Q8WXH0 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
SYNE2Q8WXH0 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC9.11□□□□□ -0.95
SYNE2Q8WXH0 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC9.11□□□□□ -0.95
SYNE2Q8WXH0 LINC02084-201ENST00000606069 1096 ntBASIC9.11□□□□□ -0.95
SYNE2Q8WXH0 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SYNE2Q8WXH0 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
SYNE2Q8WXH0 PARP1-202ENST00000366792 553 ntTSL 3 BASIC9.11□□□□□ -0.95
SYNE2Q8WXH0 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
SYNE2Q8WXH0 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
SYNE2Q8WXH0 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
SYNE2Q8WXH0 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
SYNE2Q8WXH0 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
SYNE2Q8WXH0 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
SYNE2Q8WXH0 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
SYNE2Q8WXH0 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
SYNE2Q8WXH0 AC009947.2-201ENST00000444014 672 ntBASIC9.1□□□□□ -0.95
SYNE2Q8WXH0 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
SYNE2Q8WXH0 AP003097.1-201ENST00000530657 1135 ntBASIC9.1□□□□□ -0.95
SYNE2Q8WXH0 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC9.1□□□□□ -0.95
SYNE2Q8WXH0 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC9.1□□□□□ -0.95
SYNE2Q8WXH0 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC9.1□□□□□ -0.95
SYNE2Q8WXH0 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC9.1□□□□□ -0.95
SYNE2Q8WXH0 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC9.1□□□□□ -0.95
SYNE2Q8WXH0 AC005363.2-201ENST00000618631 242 ntBASIC9.1□□□□□ -0.95
SYNE2Q8WXH0 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
SYNE2Q8WXH0 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
SYNE2Q8WXH0 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC9.1□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms