Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RPS4Y2Q8TD47 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPS4Y2Q8TD47 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
RPS4Y2Q8TD47 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RPS4Y2Q8TD47 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPS4Y2Q8TD47 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
RPS4Y2Q8TD47 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPS4Y2Q8TD47 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RPS4Y2Q8TD47 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPS4Y2Q8TD47 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPS4Y2Q8TD47 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPS4Y2Q8TD47 AC244015.2-201ENST00000616358 1861 ntBASIC19.18■□□□□ 0.66
RPS4Y2Q8TD47 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.18■□□□□ 0.66
RPS4Y2Q8TD47 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.18■□□□□ 0.66
RPS4Y2Q8TD47 AC103834.1-201ENST00000520383 144 ntBASIC19.18■□□□□ 0.66
RPS4Y2Q8TD47 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.18■□□□□ 0.66
RPS4Y2Q8TD47 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
RPS4Y2Q8TD47 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.18■□□□□ 0.66
RPS4Y2Q8TD47 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.18■□□□□ 0.66
RPS4Y2Q8TD47 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPS4Y2Q8TD47 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPS4Y2Q8TD47 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPS4Y2Q8TD47 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPS4Y2Q8TD47 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
RPS4Y2Q8TD47 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPS4Y2Q8TD47 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPS4Y2Q8TD47 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPS4Y2Q8TD47 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RPS4Y2Q8TD47 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPS4Y2Q8TD47 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RPS4Y2Q8TD47 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RPS4Y2Q8TD47 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
RPS4Y2Q8TD47 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
RPS4Y2Q8TD47 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPS4Y2Q8TD47 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPS4Y2Q8TD47 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RPS4Y2Q8TD47 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPS4Y2Q8TD47 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.17■□□□□ 0.66
RPS4Y2Q8TD47 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPS4Y2Q8TD47 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPS4Y2Q8TD47 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPS4Y2Q8TD47 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.16■□□□□ 0.66
RPS4Y2Q8TD47 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RPS4Y2Q8TD47 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RPS4Y2Q8TD47 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
RPS4Y2Q8TD47 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RPS4Y2Q8TD47 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RPS4Y2Q8TD47 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RPS4Y2Q8TD47 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RPS4Y2Q8TD47 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
RPS4Y2Q8TD47 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RPS4Y2Q8TD47 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RPS4Y2Q8TD47 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
RPS4Y2Q8TD47 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.15■□□□□ 0.66
RPS4Y2Q8TD47 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RPS4Y2Q8TD47 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RPS4Y2Q8TD47 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
RPS4Y2Q8TD47 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RPS4Y2Q8TD47 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
RPS4Y2Q8TD47 AC103724.3-201ENST00000564481 992 ntBASIC19.15■□□□□ 0.66
RPS4Y2Q8TD47 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.15■□□□□ 0.66
RPS4Y2Q8TD47 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RPS4Y2Q8TD47 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RPS4Y2Q8TD47 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
RPS4Y2Q8TD47 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.15■□□□□ 0.66
RPS4Y2Q8TD47 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RPS4Y2Q8TD47 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RPS4Y2Q8TD47 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RPS4Y2Q8TD47 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.15■□□□□ 0.66
RPS4Y2Q8TD47 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.15■□□□□ 0.66
RPS4Y2Q8TD47 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RPS4Y2Q8TD47 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.14■□□□□ 0.66
RPS4Y2Q8TD47 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.14■□□□□ 0.66
RPS4Y2Q8TD47 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RPS4Y2Q8TD47 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.14■□□□□ 0.66
RPS4Y2Q8TD47 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RPS4Y2Q8TD47 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RPS4Y2Q8TD47 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
RPS4Y2Q8TD47 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.14■□□□□ 0.65
RPS4Y2Q8TD47 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.14■□□□□ 0.65
RPS4Y2Q8TD47 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
RPS4Y2Q8TD47 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
RPS4Y2Q8TD47 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
RPS4Y2Q8TD47 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RPS4Y2Q8TD47 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RPS4Y2Q8TD47 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RPS4Y2Q8TD47 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.13■□□□□ 0.65
RPS4Y2Q8TD47 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RPS4Y2Q8TD47 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.13■□□□□ 0.65
RPS4Y2Q8TD47 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RPS4Y2Q8TD47 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RPS4Y2Q8TD47 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RPS4Y2Q8TD47 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.13■□□□□ 0.65
RPS4Y2Q8TD47 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.13■□□□□ 0.65
RPS4Y2Q8TD47 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RPS4Y2Q8TD47 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RPS4Y2Q8TD47 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RPS4Y2Q8TD47 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPS4Y2Q8TD47 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RPS4Y2Q8TD47 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms