Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC34.71■■■■□ 3.15
CFAP43Q8NDM7 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
CFAP43Q8NDM7 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC34.71■■■■□ 3.15
CFAP43Q8NDM7 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC34.71■■■■□ 3.15
CFAP43Q8NDM7 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
CFAP43Q8NDM7 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC34.71■■■■□ 3.15
CFAP43Q8NDM7 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC34.71■■■■□ 3.15
CFAP43Q8NDM7 COX20-201ENST00000366528 568 ntTSL 2 BASIC34.7■■■■□ 3.14
CFAP43Q8NDM7 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC34.7■■■■□ 3.14
CFAP43Q8NDM7 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC34.7■■■■□ 3.14
CFAP43Q8NDM7 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC34.69■■■■□ 3.14
CFAP43Q8NDM7 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC34.69■■■■□ 3.14
CFAP43Q8NDM7 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
CFAP43Q8NDM7 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
CFAP43Q8NDM7 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC34.69■■■■□ 3.14
CFAP43Q8NDM7 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC34.69■■■■□ 3.14
CFAP43Q8NDM7 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC34.68■■■■□ 3.14
CFAP43Q8NDM7 LINC01529-204ENST00000636474 1715 ntBASIC34.68■■■■□ 3.14
CFAP43Q8NDM7 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC34.68■■■■□ 3.14
CFAP43Q8NDM7 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC34.68■■■■□ 3.14
CFAP43Q8NDM7 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
CFAP43Q8NDM7 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC34.67■■■■□ 3.14
CFAP43Q8NDM7 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC34.67■■■■□ 3.14
CFAP43Q8NDM7 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC34.67■■■■□ 3.14
CFAP43Q8NDM7 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC34.67■■■■□ 3.14
CFAP43Q8NDM7 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC34.67■■■■□ 3.14
CFAP43Q8NDM7 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
CFAP43Q8NDM7 METTL26-203ENST00000397664 604 ntTSL 2 BASIC34.66■■■■□ 3.14
CFAP43Q8NDM7 GUSBP6-202ENST00000438529 1198 ntBASIC34.66■■■■□ 3.14
CFAP43Q8NDM7 AL050303.2-201ENST00000619798 666 ntBASIC34.66■■■■□ 3.14
CFAP43Q8NDM7 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
CFAP43Q8NDM7 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC34.66■■■■□ 3.14
CFAP43Q8NDM7 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
CFAP43Q8NDM7 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC34.66■■■■□ 3.14
CFAP43Q8NDM7 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC34.65■■■■□ 3.14
CFAP43Q8NDM7 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC34.65■■■■□ 3.14
CFAP43Q8NDM7 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC34.65■■■■□ 3.14
CFAP43Q8NDM7 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC34.65■■■■□ 3.14
CFAP43Q8NDM7 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC34.65■■■■□ 3.14
CFAP43Q8NDM7 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC34.65■■■■□ 3.14
CFAP43Q8NDM7 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC34.65■■■■□ 3.14
CFAP43Q8NDM7 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC34.65■■■■□ 3.14
CFAP43Q8NDM7 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC34.64■■■■□ 3.14
CFAP43Q8NDM7 TSPY20P-201ENST00000450910 630 ntBASIC34.64■■■■□ 3.14
CFAP43Q8NDM7 KRT18P6-201ENST00000555540 1265 ntBASIC34.64■■■■□ 3.14
CFAP43Q8NDM7 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC34.64■■■■□ 3.14
CFAP43Q8NDM7 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC34.64■■■■□ 3.14
CFAP43Q8NDM7 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC34.64■■■■□ 3.14
CFAP43Q8NDM7 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC34.63■■■■□ 3.13
CFAP43Q8NDM7 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC34.63■■■■□ 3.13
CFAP43Q8NDM7 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC34.63■■■■□ 3.13
CFAP43Q8NDM7 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC34.63■■■■□ 3.13
CFAP43Q8NDM7 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC34.63■■■■□ 3.13
CFAP43Q8NDM7 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC34.63■■■■□ 3.13
CFAP43Q8NDM7 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC34.63■■■■□ 3.13
CFAP43Q8NDM7 MIR4651-201ENST00000582622 73 ntBASIC34.63■■■■□ 3.13
CFAP43Q8NDM7 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC34.62■■■■□ 3.13
CFAP43Q8NDM7 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC34.62■■■■□ 3.13
CFAP43Q8NDM7 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC34.62■■■■□ 3.13
CFAP43Q8NDM7 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC34.62■■■■□ 3.13
CFAP43Q8NDM7 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC34.62■■■■□ 3.13
CFAP43Q8NDM7 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC34.62■■■■□ 3.13
CFAP43Q8NDM7 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC34.62■■■■□ 3.13
CFAP43Q8NDM7 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC34.62■■■■□ 3.13
CFAP43Q8NDM7 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC34.61■■■■□ 3.13
CFAP43Q8NDM7 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC34.61■■■■□ 3.13
CFAP43Q8NDM7 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC34.61■■■■□ 3.13
CFAP43Q8NDM7 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC34.61■■■■□ 3.13
CFAP43Q8NDM7 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC34.61■■■■□ 3.13
CFAP43Q8NDM7 GPX1P1-201ENST00000388829 606 ntBASIC34.61■■■■□ 3.13
CFAP43Q8NDM7 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
CFAP43Q8NDM7 KRT19P1-201ENST00000405746 1186 ntBASIC34.61■■■■□ 3.13
CFAP43Q8NDM7 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC34.61■■■■□ 3.13
CFAP43Q8NDM7 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC34.61■■■■□ 3.13
CFAP43Q8NDM7 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC34.61■■■■□ 3.13
CFAP43Q8NDM7 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC34.61■■■■□ 3.13
CFAP43Q8NDM7 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC34.61■■■■□ 3.13
CFAP43Q8NDM7 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC34.6■■■■□ 3.13
CFAP43Q8NDM7 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC34.6■■■■□ 3.13
CFAP43Q8NDM7 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC34.6■■■■□ 3.13
CFAP43Q8NDM7 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC34.6■■■■□ 3.13
CFAP43Q8NDM7 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC34.6■■■■□ 3.13
CFAP43Q8NDM7 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC34.6■■■■□ 3.13
CFAP43Q8NDM7 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC34.6■■■■□ 3.13
CFAP43Q8NDM7 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC34.6■■■■□ 3.13
CFAP43Q8NDM7 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC34.6■■■■□ 3.13
CFAP43Q8NDM7 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC34.6■■■■□ 3.13
CFAP43Q8NDM7 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC34.6■■■■□ 3.13
CFAP43Q8NDM7 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC34.6■■■■□ 3.13
CFAP43Q8NDM7 SLC7A5P2-201ENST00000553010 536 ntBASIC34.6■■■■□ 3.13
CFAP43Q8NDM7 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
CFAP43Q8NDM7 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
CFAP43Q8NDM7 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC34.59■■■■□ 3.13
CFAP43Q8NDM7 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
CFAP43Q8NDM7 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC34.59■■■■□ 3.13
CFAP43Q8NDM7 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC34.59■■■■□ 3.13
CFAP43Q8NDM7 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC34.58■■■■□ 3.13
CFAP43Q8NDM7 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC34.58■■■■□ 3.13
CFAP43Q8NDM7 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
CFAP43Q8NDM7 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC34.57■■■■□ 3.13
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms