Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
C3orf56Q8N813 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
C3orf56Q8N813 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
C3orf56Q8N813 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
C3orf56Q8N813 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
C3orf56Q8N813 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC17.17■□□□□ 0.34
C3orf56Q8N813 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.17■□□□□ 0.34
C3orf56Q8N813 AC069152.1-201ENST00000438030 544 ntBASIC17.17■□□□□ 0.34
C3orf56Q8N813 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.17■□□□□ 0.34
C3orf56Q8N813 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.17■□□□□ 0.34
C3orf56Q8N813 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
C3orf56Q8N813 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.17■□□□□ 0.34
C3orf56Q8N813 AC008687.6-201ENST00000596318 630 ntBASIC17.17■□□□□ 0.34
C3orf56Q8N813 AL050303.2-201ENST00000619798 666 ntBASIC17.17■□□□□ 0.34
C3orf56Q8N813 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
C3orf56Q8N813 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
C3orf56Q8N813 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
C3orf56Q8N813 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.16■□□□□ 0.34
C3orf56Q8N813 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.16■□□□□ 0.34
C3orf56Q8N813 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
C3orf56Q8N813 SLC7A5P2-201ENST00000553010 536 ntBASIC17.16■□□□□ 0.34
C3orf56Q8N813 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
C3orf56Q8N813 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC17.16■□□□□ 0.34
C3orf56Q8N813 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
C3orf56Q8N813 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
C3orf56Q8N813 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC17.16■□□□□ 0.34
C3orf56Q8N813 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
C3orf56Q8N813 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
C3orf56Q8N813 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC17.15■□□□□ 0.34
C3orf56Q8N813 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
C3orf56Q8N813 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
C3orf56Q8N813 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
C3orf56Q8N813 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
C3orf56Q8N813 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC17.15■□□□□ 0.34
C3orf56Q8N813 AC068587.7-201ENST00000641602 218 ntBASIC17.15■□□□□ 0.34
C3orf56Q8N813 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
C3orf56Q8N813 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
C3orf56Q8N813 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
C3orf56Q8N813 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
C3orf56Q8N813 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
C3orf56Q8N813 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC17.15■□□□□ 0.34
C3orf56Q8N813 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
C3orf56Q8N813 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
C3orf56Q8N813 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
C3orf56Q8N813 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
C3orf56Q8N813 POU5F1P3-201ENST00000428824 1078 ntBASIC17.14■□□□□ 0.33
C3orf56Q8N813 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.14■□□□□ 0.33
C3orf56Q8N813 AP006294.2-201ENST00000641667 209 ntBASIC17.14■□□□□ 0.33
C3orf56Q8N813 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
C3orf56Q8N813 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
C3orf56Q8N813 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
C3orf56Q8N813 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
C3orf56Q8N813 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
C3orf56Q8N813 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
C3orf56Q8N813 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
C3orf56Q8N813 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
C3orf56Q8N813 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
C3orf56Q8N813 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
C3orf56Q8N813 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
C3orf56Q8N813 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.13■□□□□ 0.33
C3orf56Q8N813 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.13■□□□□ 0.33
C3orf56Q8N813 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.13■□□□□ 0.33
C3orf56Q8N813 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.13■□□□□ 0.33
C3orf56Q8N813 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17.13■□□□□ 0.33
C3orf56Q8N813 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
C3orf56Q8N813 CPT2-209ENST00000636935 803 ntTSL 5 BASIC17.13■□□□□ 0.33
C3orf56Q8N813 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
C3orf56Q8N813 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
C3orf56Q8N813 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
C3orf56Q8N813 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC17.13■□□□□ 0.33
C3orf56Q8N813 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
C3orf56Q8N813 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
C3orf56Q8N813 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
C3orf56Q8N813 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
C3orf56Q8N813 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
C3orf56Q8N813 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
C3orf56Q8N813 AC144652.1-201ENST00000609974 1624 ntBASIC17.12■□□□□ 0.33
C3orf56Q8N813 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
C3orf56Q8N813 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.12■□□□□ 0.33
C3orf56Q8N813 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
C3orf56Q8N813 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
C3orf56Q8N813 GUSBP6-202ENST00000438529 1198 ntBASIC17.12■□□□□ 0.33
C3orf56Q8N813 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
C3orf56Q8N813 AF201337.1-201ENST00000520239 748 ntBASIC17.12■□□□□ 0.33
C3orf56Q8N813 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
C3orf56Q8N813 ITM2C-210ENST00000620962 501 ntBASIC17.12■□□□□ 0.33
C3orf56Q8N813 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
C3orf56Q8N813 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
C3orf56Q8N813 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
C3orf56Q8N813 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC17.12■□□□□ 0.33
C3orf56Q8N813 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
C3orf56Q8N813 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC17.11■□□□□ 0.33
C3orf56Q8N813 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
C3orf56Q8N813 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
C3orf56Q8N813 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C3orf56Q8N813 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.11■□□□□ 0.33
C3orf56Q8N813 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.11■□□□□ 0.33
C3orf56Q8N813 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
C3orf56Q8N813 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C3orf56Q8N813 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms