Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 PPP1R14BP3-201ENST00000509033 445 ntBASIC22.37■■□□□ 1.17
SYNPOQ8N3V7 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC22.37■■□□□ 1.17
SYNPOQ8N3V7 AC087239.1-201ENST00000622671 572 ntBASIC22.37■■□□□ 1.17
SYNPOQ8N3V7 WWOX-218ENST00000627394 894 ntTSL 5 BASIC22.37■■□□□ 1.17
SYNPOQ8N3V7 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
SYNPOQ8N3V7 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC22.37■■□□□ 1.17
SYNPOQ8N3V7 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
SYNPOQ8N3V7 AC004854.2-201ENST00000608450 1441 ntBASIC22.37■■□□□ 1.17
SYNPOQ8N3V7 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
SYNPOQ8N3V7 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
SYNPOQ8N3V7 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SYNPOQ8N3V7 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
SYNPOQ8N3V7 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SYNPOQ8N3V7 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC22.36■■□□□ 1.17
SYNPOQ8N3V7 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC22.36■■□□□ 1.17
SYNPOQ8N3V7 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC22.36■■□□□ 1.17
SYNPOQ8N3V7 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC22.36■■□□□ 1.17
SYNPOQ8N3V7 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
SYNPOQ8N3V7 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
SYNPOQ8N3V7 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SYNPOQ8N3V7 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC22.35■■□□□ 1.17
SYNPOQ8N3V7 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
SYNPOQ8N3V7 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SYNPOQ8N3V7 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
SYNPOQ8N3V7 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC22.35■■□□□ 1.17
SYNPOQ8N3V7 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
SYNPOQ8N3V7 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SYNPOQ8N3V7 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
SYNPOQ8N3V7 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
SYNPOQ8N3V7 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SYNPOQ8N3V7 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.34■■□□□ 1.17
SYNPOQ8N3V7 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
SYNPOQ8N3V7 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SYNPOQ8N3V7 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
SYNPOQ8N3V7 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC22.34■■□□□ 1.17
SYNPOQ8N3V7 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC22.34■■□□□ 1.17
SYNPOQ8N3V7 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC22.34■■□□□ 1.17
SYNPOQ8N3V7 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SYNPOQ8N3V7 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SYNPOQ8N3V7 EED-207ENST00000528180 1745 ntTSL 5 BASIC22.34■■□□□ 1.17
SYNPOQ8N3V7 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SYNPOQ8N3V7 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC22.34■■□□□ 1.17
SYNPOQ8N3V7 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
SYNPOQ8N3V7 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.17
SYNPOQ8N3V7 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SYNPOQ8N3V7 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
SYNPOQ8N3V7 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
SYNPOQ8N3V7 AC006970.2-201ENST00000450065 779 ntBASIC22.33■■□□□ 1.17
SYNPOQ8N3V7 AC104771.1-201ENST00000603335 964 ntBASIC22.33■■□□□ 1.17
SYNPOQ8N3V7 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SYNPOQ8N3V7 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SYNPOQ8N3V7 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SYNPOQ8N3V7 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SYNPOQ8N3V7 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SYNPOQ8N3V7 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC22.32■■□□□ 1.16
SYNPOQ8N3V7 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SYNPOQ8N3V7 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC22.32■■□□□ 1.16
SYNPOQ8N3V7 CPT2-209ENST00000636935 803 ntTSL 5 BASIC22.32■■□□□ 1.16
SYNPOQ8N3V7 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SYNPOQ8N3V7 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SYNPOQ8N3V7 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SYNPOQ8N3V7 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SYNPOQ8N3V7 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
SYNPOQ8N3V7 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC22.31■■□□□ 1.16
SYNPOQ8N3V7 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SYNPOQ8N3V7 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SYNPOQ8N3V7 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SYNPOQ8N3V7 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC22.31■■□□□ 1.16
SYNPOQ8N3V7 MAP2K4P1-201ENST00000438453 1195 ntBASIC22.31■■□□□ 1.16
SYNPOQ8N3V7 AC010141.3-201ENST00000456659 717 ntBASIC22.31■■□□□ 1.16
SYNPOQ8N3V7 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC22.31■■□□□ 1.16
SYNPOQ8N3V7 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC22.31■■□□□ 1.16
SYNPOQ8N3V7 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC22.31■■□□□ 1.16
SYNPOQ8N3V7 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC22.31■■□□□ 1.16
SYNPOQ8N3V7 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC22.31■■□□□ 1.16
SYNPOQ8N3V7 MDK-213ENST00000617138 635 ntTSL 2 BASIC22.31■■□□□ 1.16
SYNPOQ8N3V7 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC22.31■■□□□ 1.16
SYNPOQ8N3V7 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SYNPOQ8N3V7 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
SYNPOQ8N3V7 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SYNPOQ8N3V7 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SYNPOQ8N3V7 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SYNPOQ8N3V7 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SYNPOQ8N3V7 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SYNPOQ8N3V7 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SYNPOQ8N3V7 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC22.3■■□□□ 1.16
SYNPOQ8N3V7 TESC-206ENST00000541210 936 ntTSL 3 BASIC22.3■■□□□ 1.16
SYNPOQ8N3V7 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC22.3■■□□□ 1.16
SYNPOQ8N3V7 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC22.3■■□□□ 1.16
SYNPOQ8N3V7 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SYNPOQ8N3V7 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SYNPOQ8N3V7 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
SYNPOQ8N3V7 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC22.3■■□□□ 1.16
SYNPOQ8N3V7 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SYNPOQ8N3V7 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
SYNPOQ8N3V7 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SYNPOQ8N3V7 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SYNPOQ8N3V7 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SYNPOQ8N3V7 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC22.29■■□□□ 1.16
SYNPOQ8N3V7 NCF1B-203ENST00000435988 1254 ntBASIC22.29■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms