Protein–RNA interactions for Protein: Q8N257

HIST3H2BB, Histone H2B type 3-B, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2BBQ8N257 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIST3H2BBQ8N257 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC16.47■□□□□ 0.23
HIST3H2BBQ8N257 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIST3H2BBQ8N257 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC16.47■□□□□ 0.23
HIST3H2BBQ8N257 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HIST3H2BBQ8N257 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC16.46■□□□□ 0.23
HIST3H2BBQ8N257 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HIST3H2BBQ8N257 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HIST3H2BBQ8N257 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC16.46■□□□□ 0.23
HIST3H2BBQ8N257 BX323043.1-201ENST00000641006 1765 ntBASIC16.46■□□□□ 0.23
HIST3H2BBQ8N257 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
HIST3H2BBQ8N257 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
HIST3H2BBQ8N257 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HIST3H2BBQ8N257 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
HIST3H2BBQ8N257 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC16.46■□□□□ 0.23
HIST3H2BBQ8N257 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HIST3H2BBQ8N257 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HIST3H2BBQ8N257 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
HIST3H2BBQ8N257 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
HIST3H2BBQ8N257 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HIST3H2BBQ8N257 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HIST3H2BBQ8N257 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HIST3H2BBQ8N257 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HIST3H2BBQ8N257 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
HIST3H2BBQ8N257 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
HIST3H2BBQ8N257 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
HIST3H2BBQ8N257 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC16.46■□□□□ 0.22
HIST3H2BBQ8N257 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC16.45■□□□□ 0.22
HIST3H2BBQ8N257 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIST3H2BBQ8N257 AC110285.7-201ENST00000624417 1536 ntBASIC16.45■□□□□ 0.22
HIST3H2BBQ8N257 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIST3H2BBQ8N257 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIST3H2BBQ8N257 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIST3H2BBQ8N257 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC16.45■□□□□ 0.22
HIST3H2BBQ8N257 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIST3H2BBQ8N257 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIST3H2BBQ8N257 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.45■□□□□ 0.22
HIST3H2BBQ8N257 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIST3H2BBQ8N257 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
HIST3H2BBQ8N257 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HIST3H2BBQ8N257 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIST3H2BBQ8N257 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
HIST3H2BBQ8N257 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
HIST3H2BBQ8N257 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HIST3H2BBQ8N257 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HIST3H2BBQ8N257 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC16.44■□□□□ 0.22
HIST3H2BBQ8N257 FEM1AP4-201ENST00000443167 1987 ntBASIC16.44■□□□□ 0.22
HIST3H2BBQ8N257 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HIST3H2BBQ8N257 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.44■□□□□ 0.22
HIST3H2BBQ8N257 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC16.44■□□□□ 0.22
HIST3H2BBQ8N257 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HIST3H2BBQ8N257 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HIST3H2BBQ8N257 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
HIST3H2BBQ8N257 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC16.44■□□□□ 0.22
HIST3H2BBQ8N257 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HIST3H2BBQ8N257 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
HIST3H2BBQ8N257 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HIST3H2BBQ8N257 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HIST3H2BBQ8N257 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIST3H2BBQ8N257 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIST3H2BBQ8N257 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIST3H2BBQ8N257 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIST3H2BBQ8N257 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.43■□□□□ 0.22
HIST3H2BBQ8N257 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIST3H2BBQ8N257 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIST3H2BBQ8N257 DENR-202ENST00000455982 1052 ntTSL 5 BASIC16.43■□□□□ 0.22
HIST3H2BBQ8N257 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIST3H2BBQ8N257 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC16.43■□□□□ 0.22
HIST3H2BBQ8N257 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
HIST3H2BBQ8N257 AL161729.1-201ENST00000604104 1402 ntBASIC16.43■□□□□ 0.22
HIST3H2BBQ8N257 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
HIST3H2BBQ8N257 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HIST3H2BBQ8N257 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HIST3H2BBQ8N257 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
HIST3H2BBQ8N257 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIST3H2BBQ8N257 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HIST3H2BBQ8N257 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIST3H2BBQ8N257 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIST3H2BBQ8N257 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
HIST3H2BBQ8N257 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC16.42■□□□□ 0.22
HIST3H2BBQ8N257 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIST3H2BBQ8N257 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HIST3H2BBQ8N257 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC16.42■□□□□ 0.22
HIST3H2BBQ8N257 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIST3H2BBQ8N257 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
HIST3H2BBQ8N257 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIST3H2BBQ8N257 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HIST3H2BBQ8N257 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
HIST3H2BBQ8N257 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HIST3H2BBQ8N257 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC16.42■□□□□ 0.22
HIST3H2BBQ8N257 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HIST3H2BBQ8N257 AC098818.2-201ENST00000564925 2320 ntBASIC16.41■□□□□ 0.22
HIST3H2BBQ8N257 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HIST3H2BBQ8N257 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HIST3H2BBQ8N257 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HIST3H2BBQ8N257 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HIST3H2BBQ8N257 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HIST3H2BBQ8N257 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HIST3H2BBQ8N257 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HIST3H2BBQ8N257 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms