Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.77■■□□□ 1.08
TRIM42Q8IWZ5 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM42Q8IWZ5 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM42Q8IWZ5 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.77■■□□□ 1.08
TRIM42Q8IWZ5 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
TRIM42Q8IWZ5 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
TRIM42Q8IWZ5 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TRIM42Q8IWZ5 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
TRIM42Q8IWZ5 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.77■■□□□ 1.08
TRIM42Q8IWZ5 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.77■■□□□ 1.08
TRIM42Q8IWZ5 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.77■■□□□ 1.08
TRIM42Q8IWZ5 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.77■■□□□ 1.08
TRIM42Q8IWZ5 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
TRIM42Q8IWZ5 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.77■■□□□ 1.08
TRIM42Q8IWZ5 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.77■■□□□ 1.07
TRIM42Q8IWZ5 AC010542.4-201ENST00000563151 1910 ntBASIC21.76■■□□□ 1.07
TRIM42Q8IWZ5 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.76■■□□□ 1.07
TRIM42Q8IWZ5 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
TRIM42Q8IWZ5 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.76■■□□□ 1.07
TRIM42Q8IWZ5 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.76■■□□□ 1.07
TRIM42Q8IWZ5 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM42Q8IWZ5 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.76■■□□□ 1.07
TRIM42Q8IWZ5 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM42Q8IWZ5 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
TRIM42Q8IWZ5 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM42Q8IWZ5 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRIM42Q8IWZ5 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.76■■□□□ 1.07
TRIM42Q8IWZ5 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.76■■□□□ 1.07
TRIM42Q8IWZ5 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRIM42Q8IWZ5 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.75■■□□□ 1.07
TRIM42Q8IWZ5 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TRIM42Q8IWZ5 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRIM42Q8IWZ5 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRIM42Q8IWZ5 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
TRIM42Q8IWZ5 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.75■■□□□ 1.07
TRIM42Q8IWZ5 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRIM42Q8IWZ5 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
TRIM42Q8IWZ5 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRIM42Q8IWZ5 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRIM42Q8IWZ5 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
TRIM42Q8IWZ5 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
TRIM42Q8IWZ5 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM42Q8IWZ5 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.74■■□□□ 1.07
TRIM42Q8IWZ5 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
TRIM42Q8IWZ5 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM42Q8IWZ5 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.74■■□□□ 1.07
TRIM42Q8IWZ5 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM42Q8IWZ5 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRIM42Q8IWZ5 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.73■■□□□ 1.07
TRIM42Q8IWZ5 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM42Q8IWZ5 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM42Q8IWZ5 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.73■■□□□ 1.07
TRIM42Q8IWZ5 AC010980.1-201ENST00000587192 1142 ntBASIC21.73■■□□□ 1.07
TRIM42Q8IWZ5 AC074183.2-201ENST00000623112 922 ntBASIC21.73■■□□□ 1.07
TRIM42Q8IWZ5 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRIM42Q8IWZ5 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
TRIM42Q8IWZ5 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
TRIM42Q8IWZ5 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM42Q8IWZ5 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
TRIM42Q8IWZ5 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM42Q8IWZ5 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM42Q8IWZ5 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM42Q8IWZ5 MIR4281-201ENST00000580852 62 ntBASIC21.72■■□□□ 1.07
TRIM42Q8IWZ5 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM42Q8IWZ5 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TRIM42Q8IWZ5 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.72■■□□□ 1.07
TRIM42Q8IWZ5 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.72■■□□□ 1.07
TRIM42Q8IWZ5 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.72■■□□□ 1.07
TRIM42Q8IWZ5 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM42Q8IWZ5 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM42Q8IWZ5 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.71■■□□□ 1.07
TRIM42Q8IWZ5 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
TRIM42Q8IWZ5 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM42Q8IWZ5 KRT18P24-201ENST00000344739 1156 ntBASIC21.71■■□□□ 1.07
TRIM42Q8IWZ5 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
TRIM42Q8IWZ5 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
TRIM42Q8IWZ5 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM42Q8IWZ5 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM42Q8IWZ5 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.71■■□□□ 1.07
TRIM42Q8IWZ5 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM42Q8IWZ5 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM42Q8IWZ5 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM42Q8IWZ5 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM42Q8IWZ5 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM42Q8IWZ5 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM42Q8IWZ5 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM42Q8IWZ5 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM42Q8IWZ5 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.7■■□□□ 1.06
TRIM42Q8IWZ5 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM42Q8IWZ5 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM42Q8IWZ5 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.7■■□□□ 1.06
TRIM42Q8IWZ5 THA1P-201ENST00000590384 1145 ntBASIC21.7■■□□□ 1.06
TRIM42Q8IWZ5 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM42Q8IWZ5 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM42Q8IWZ5 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM42Q8IWZ5 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM42Q8IWZ5 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM42Q8IWZ5 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM42Q8IWZ5 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM42Q8IWZ5 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms