Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC25.29■■□□□ 1.64
COL13A1Q5TAT6 LINC01003-201ENST00000564834 1764 ntBASIC25.28■■□□□ 1.64
COL13A1Q5TAT6 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
COL13A1Q5TAT6 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
COL13A1Q5TAT6 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
COL13A1Q5TAT6 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
COL13A1Q5TAT6 RNF146-204ENST00000476956 884 ntTSL 2 BASIC25.28■■□□□ 1.64
COL13A1Q5TAT6 AL049597.2-201ENST00000565575 961 ntBASIC25.28■■□□□ 1.64
COL13A1Q5TAT6 AL121894.2-201ENST00000602977 491 ntBASIC25.28■■□□□ 1.64
COL13A1Q5TAT6 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
COL13A1Q5TAT6 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
COL13A1Q5TAT6 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
COL13A1Q5TAT6 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
COL13A1Q5TAT6 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC25.27■■□□□ 1.64
COL13A1Q5TAT6 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
COL13A1Q5TAT6 BX276092.2-201ENST00000417668 665 ntBASIC25.27■■□□□ 1.64
COL13A1Q5TAT6 RNF121-214ENST00000533380 870 ntTSL 3 BASIC25.27■■□□□ 1.64
COL13A1Q5TAT6 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC25.27■■□□□ 1.64
COL13A1Q5TAT6 RMI2-205ENST00000576027 818 ntTSL 2 BASIC25.27■■□□□ 1.64
COL13A1Q5TAT6 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
COL13A1Q5TAT6 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC25.27■■□□□ 1.64
COL13A1Q5TAT6 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC25.27■■□□□ 1.64
COL13A1Q5TAT6 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC25.27■■□□□ 1.64
COL13A1Q5TAT6 PROC-203ENST00000409048 1586 ntTSL 5 BASIC25.27■■□□□ 1.64
COL13A1Q5TAT6 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
COL13A1Q5TAT6 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
COL13A1Q5TAT6 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC25.26■■□□□ 1.63
COL13A1Q5TAT6 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
COL13A1Q5TAT6 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
COL13A1Q5TAT6 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC25.26■■□□□ 1.63
COL13A1Q5TAT6 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
COL13A1Q5TAT6 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC25.26■■□□□ 1.63
COL13A1Q5TAT6 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC25.25■■□□□ 1.63
COL13A1Q5TAT6 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
COL13A1Q5TAT6 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
COL13A1Q5TAT6 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC25.25■■□□□ 1.63
COL13A1Q5TAT6 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC25.25■■□□□ 1.63
COL13A1Q5TAT6 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
COL13A1Q5TAT6 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC25.25■■□□□ 1.63
COL13A1Q5TAT6 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
COL13A1Q5TAT6 SPIB-206ENST00000596074 847 ntTSL 2 BASIC25.25■■□□□ 1.63
COL13A1Q5TAT6 DRD5P2-201ENST00000421395 2012 ntBASIC25.25■■□□□ 1.63
COL13A1Q5TAT6 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
COL13A1Q5TAT6 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC25.24■■□□□ 1.63
COL13A1Q5TAT6 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
COL13A1Q5TAT6 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
COL13A1Q5TAT6 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC25.24■■□□□ 1.63
COL13A1Q5TAT6 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC25.24■■□□□ 1.63
COL13A1Q5TAT6 C1QBPP2-201ENST00000528754 825 ntBASIC25.24■■□□□ 1.63
COL13A1Q5TAT6 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
COL13A1Q5TAT6 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC25.24■■□□□ 1.63
COL13A1Q5TAT6 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC25.24■■□□□ 1.63
COL13A1Q5TAT6 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC25.24■■□□□ 1.63
COL13A1Q5TAT6 CD177P1-201ENST00000606252 935 ntBASIC25.24■■□□□ 1.63
COL13A1Q5TAT6 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC25.24■■□□□ 1.63
COL13A1Q5TAT6 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC25.24■■□□□ 1.63
COL13A1Q5TAT6 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC25.24■■□□□ 1.63
COL13A1Q5TAT6 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC25.23■■□□□ 1.63
COL13A1Q5TAT6 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
COL13A1Q5TAT6 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
COL13A1Q5TAT6 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
COL13A1Q5TAT6 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC25.23■■□□□ 1.63
COL13A1Q5TAT6 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
COL13A1Q5TAT6 CYP2T1P-201ENST00000432607 1285 ntBASIC25.23■■□□□ 1.63
COL13A1Q5TAT6 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
COL13A1Q5TAT6 AC093787.1-201ENST00000450396 207 ntBASIC25.23■■□□□ 1.63
COL13A1Q5TAT6 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC25.23■■□□□ 1.63
COL13A1Q5TAT6 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC25.23■■□□□ 1.63
COL13A1Q5TAT6 CYP2T3P-201ENST00000601990 817 ntBASIC25.23■■□□□ 1.63
COL13A1Q5TAT6 AC010536.3-201ENST00000620306 533 ntBASIC25.23■■□□□ 1.63
COL13A1Q5TAT6 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
COL13A1Q5TAT6 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
COL13A1Q5TAT6 USF2-207ENST00000595068 1612 ntTSL 5 BASIC25.23■■□□□ 1.63
COL13A1Q5TAT6 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
COL13A1Q5TAT6 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC25.22■■□□□ 1.63
COL13A1Q5TAT6 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
COL13A1Q5TAT6 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
COL13A1Q5TAT6 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC25.22■■□□□ 1.63
COL13A1Q5TAT6 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
COL13A1Q5TAT6 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC25.22■■□□□ 1.63
COL13A1Q5TAT6 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC25.22■■□□□ 1.63
COL13A1Q5TAT6 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC25.22■■□□□ 1.63
COL13A1Q5TAT6 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC25.22■■□□□ 1.63
COL13A1Q5TAT6 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
COL13A1Q5TAT6 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
COL13A1Q5TAT6 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
COL13A1Q5TAT6 MDFI-202ENST00000373050 809 ntTSL 2 BASIC25.21■■□□□ 1.63
COL13A1Q5TAT6 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
COL13A1Q5TAT6 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC25.21■■□□□ 1.63
COL13A1Q5TAT6 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
COL13A1Q5TAT6 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
COL13A1Q5TAT6 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
COL13A1Q5TAT6 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
COL13A1Q5TAT6 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
COL13A1Q5TAT6 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC25.21■■□□□ 1.63
COL13A1Q5TAT6 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC25.2■■□□□ 1.63
COL13A1Q5TAT6 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
COL13A1Q5TAT6 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.62
COL13A1Q5TAT6 AC091874.3-201ENST00000512672 1195 ntBASIC25.2■■□□□ 1.62
COL13A1Q5TAT6 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC25.2■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms