Protein–RNA interactions for Protein: Q2MJR0

SPRED3, Sprouty-related, EVH1 domain-containing protein 3, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPRED3Q2MJR0 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
SPRED3Q2MJR0 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SPRED3Q2MJR0 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
SPRED3Q2MJR0 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SPRED3Q2MJR0 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
SPRED3Q2MJR0 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SPRED3Q2MJR0 AC120024.1-201ENST00000562672 995 ntBASIC21.85■■□□□ 1.09
SPRED3Q2MJR0 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SPRED3Q2MJR0 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SPRED3Q2MJR0 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
SPRED3Q2MJR0 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.85■■□□□ 1.09
SPRED3Q2MJR0 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SPRED3Q2MJR0 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.84■■□□□ 1.09
SPRED3Q2MJR0 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SPRED3Q2MJR0 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
SPRED3Q2MJR0 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SPRED3Q2MJR0 THA1P-201ENST00000590384 1145 ntBASIC21.84■■□□□ 1.09
SPRED3Q2MJR0 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.84■■□□□ 1.09
SPRED3Q2MJR0 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SPRED3Q2MJR0 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SPRED3Q2MJR0 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SPRED3Q2MJR0 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.83■■□□□ 1.09
SPRED3Q2MJR0 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
SPRED3Q2MJR0 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.83■■□□□ 1.09
SPRED3Q2MJR0 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SPRED3Q2MJR0 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SPRED3Q2MJR0 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
SPRED3Q2MJR0 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SPRED3Q2MJR0 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SPRED3Q2MJR0 AL031848.2-201ENST00000607670 837 ntBASIC21.82■■□□□ 1.08
SPRED3Q2MJR0 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.82■■□□□ 1.08
SPRED3Q2MJR0 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SPRED3Q2MJR0 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
SPRED3Q2MJR0 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC21.82■■□□□ 1.08
SPRED3Q2MJR0 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.82■■□□□ 1.08
SPRED3Q2MJR0 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SPRED3Q2MJR0 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
SPRED3Q2MJR0 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
SPRED3Q2MJR0 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SPRED3Q2MJR0 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
SPRED3Q2MJR0 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.82■■□□□ 1.08
SPRED3Q2MJR0 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SPRED3Q2MJR0 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SPRED3Q2MJR0 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SPRED3Q2MJR0 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC21.81■■□□□ 1.08
SPRED3Q2MJR0 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SPRED3Q2MJR0 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SPRED3Q2MJR0 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SPRED3Q2MJR0 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SPRED3Q2MJR0 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SPRED3Q2MJR0 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SPRED3Q2MJR0 AC087742.1-201ENST00000575880 1738 ntBASIC21.8■■□□□ 1.08
SPRED3Q2MJR0 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SPRED3Q2MJR0 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SPRED3Q2MJR0 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SPRED3Q2MJR0 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SPRED3Q2MJR0 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SPRED3Q2MJR0 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SPRED3Q2MJR0 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.8■■□□□ 1.08
SPRED3Q2MJR0 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SPRED3Q2MJR0 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
SPRED3Q2MJR0 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SPRED3Q2MJR0 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
SPRED3Q2MJR0 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.8■■□□□ 1.08
SPRED3Q2MJR0 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.8■■□□□ 1.08
SPRED3Q2MJR0 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SPRED3Q2MJR0 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SPRED3Q2MJR0 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SPRED3Q2MJR0 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SPRED3Q2MJR0 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.79■■□□□ 1.08
SPRED3Q2MJR0 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SPRED3Q2MJR0 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SPRED3Q2MJR0 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.79■■□□□ 1.08
SPRED3Q2MJR0 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.79■■□□□ 1.08
SPRED3Q2MJR0 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.79■■□□□ 1.08
SPRED3Q2MJR0 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SPRED3Q2MJR0 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SPRED3Q2MJR0 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
SPRED3Q2MJR0 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SPRED3Q2MJR0 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
SPRED3Q2MJR0 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.78■■□□□ 1.08
SPRED3Q2MJR0 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.78■■□□□ 1.08
SPRED3Q2MJR0 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
SPRED3Q2MJR0 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SPRED3Q2MJR0 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.78■■□□□ 1.08
SPRED3Q2MJR0 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
SPRED3Q2MJR0 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SPRED3Q2MJR0 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SPRED3Q2MJR0 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SPRED3Q2MJR0 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
SPRED3Q2MJR0 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SPRED3Q2MJR0 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SPRED3Q2MJR0 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SPRED3Q2MJR0 MIR4281-201ENST00000580852 62 ntBASIC21.77■■□□□ 1.08
SPRED3Q2MJR0 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SPRED3Q2MJR0 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.07
SPRED3Q2MJR0 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
SPRED3Q2MJR0 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
SPRED3Q2MJR0 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SPRED3Q2MJR0 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms