Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HCFC1P51610 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HCFC1P51610 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HCFC1P51610 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HCFC1P51610 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HCFC1P51610 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
HCFC1P51610 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.24■□□□□ 0.67
HCFC1P51610 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HCFC1P51610 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
HCFC1P51610 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.24■□□□□ 0.67
HCFC1P51610 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HCFC1P51610 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.23■□□□□ 0.67
HCFC1P51610 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HCFC1P51610 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
HCFC1P51610 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.23■□□□□ 0.67
HCFC1P51610 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HCFC1P51610 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.23■□□□□ 0.67
HCFC1P51610 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.23■□□□□ 0.67
HCFC1P51610 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.23■□□□□ 0.67
HCFC1P51610 AC004687.1-201ENST00000579003 1625 ntBASIC19.23■□□□□ 0.67
HCFC1P51610 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HCFC1P51610 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.22■□□□□ 0.67
HCFC1P51610 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HCFC1P51610 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
HCFC1P51610 AL355802.2-201ENST00000402069 882 ntBASIC19.22■□□□□ 0.67
HCFC1P51610 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.22■□□□□ 0.67
HCFC1P51610 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.22■□□□□ 0.67
HCFC1P51610 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.22■□□□□ 0.67
HCFC1P51610 AC068587.7-201ENST00000641602 218 ntBASIC19.22■□□□□ 0.67
HCFC1P51610 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
HCFC1P51610 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HCFC1P51610 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
HCFC1P51610 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.22■□□□□ 0.67
HCFC1P51610 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HCFC1P51610 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.21■□□□□ 0.67
HCFC1P51610 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
HCFC1P51610 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.21■□□□□ 0.67
HCFC1P51610 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.21■□□□□ 0.67
HCFC1P51610 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HCFC1P51610 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HCFC1P51610 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.21■□□□□ 0.67
HCFC1P51610 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.21■□□□□ 0.67
HCFC1P51610 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HCFC1P51610 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HCFC1P51610 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HCFC1P51610 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HCFC1P51610 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HCFC1P51610 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
HCFC1P51610 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HCFC1P51610 NCF1B-203ENST00000435988 1254 ntBASIC19.2■□□□□ 0.66
HCFC1P51610 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.2■□□□□ 0.66
HCFC1P51610 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HCFC1P51610 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
HCFC1P51610 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.2■□□□□ 0.66
HCFC1P51610 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
HCFC1P51610 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.2■□□□□ 0.66
HCFC1P51610 AL109923.1-201ENST00000618799 583 ntBASIC19.2■□□□□ 0.66
HCFC1P51610 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HCFC1P51610 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HCFC1P51610 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.19■□□□□ 0.66
HCFC1P51610 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HCFC1P51610 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HCFC1P51610 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HCFC1P51610 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HCFC1P51610 KRT18P11-201ENST00000435214 1283 ntBASIC19.18■□□□□ 0.66
HCFC1P51610 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.18■□□□□ 0.66
HCFC1P51610 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HCFC1P51610 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HCFC1P51610 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HCFC1P51610 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HCFC1P51610 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HCFC1P51610 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HCFC1P51610 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.18■□□□□ 0.66
HCFC1P51610 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.18■□□□□ 0.66
HCFC1P51610 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.18■□□□□ 0.66
HCFC1P51610 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HCFC1P51610 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HCFC1P51610 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HCFC1P51610 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.18■□□□□ 0.66
HCFC1P51610 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HCFC1P51610 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
HCFC1P51610 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
HCFC1P51610 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HCFC1P51610 AL139125.2-201ENST00000623134 1869 ntBASIC19.17■□□□□ 0.66
HCFC1P51610 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.17■□□□□ 0.66
HCFC1P51610 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.17■□□□□ 0.66
HCFC1P51610 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HCFC1P51610 AC006970.2-201ENST00000450065 779 ntBASIC19.17■□□□□ 0.66
HCFC1P51610 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.17■□□□□ 0.66
HCFC1P51610 SMUG1P1-201ENST00000590640 811 ntBASIC19.17■□□□□ 0.66
HCFC1P51610 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HCFC1P51610 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HCFC1P51610 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
HCFC1P51610 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HCFC1P51610 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.17■□□□□ 0.66
HCFC1P51610 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HCFC1P51610 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
HCFC1P51610 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HCFC1P51610 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.16■□□□□ 0.66
HCFC1P51610 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms