Protein–RNA interactions for Protein: P50750

CDK9, Cyclin-dependent kinase 9, humanhuman

Known RBP Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9P50750 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDK9P50750 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CDK9P50750 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDK9P50750 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDK9P50750 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.98■□□□□ 0.95
CDK9P50750 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.98■□□□□ 0.95
CDK9P50750 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
CDK9P50750 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.98■□□□□ 0.95
CDK9P50750 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.98■□□□□ 0.95
CDK9P50750 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.98■□□□□ 0.95
CDK9P50750 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDK9P50750 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.97■□□□□ 0.95
CDK9P50750 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDK9P50750 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDK9P50750 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.97■□□□□ 0.95
CDK9P50750 MIR6724-1-201ENST00000616420 92 ntBASIC20.97■□□□□ 0.95
CDK9P50750 MIR6724-2-201ENST00000616483 92 ntBASIC20.97■□□□□ 0.95
CDK9P50750 MIR6724-4-201ENST00000617390 92 ntBASIC20.97■□□□□ 0.95
CDK9P50750 MIR6724-3-201ENST00000622482 92 ntBASIC20.97■□□□□ 0.95
CDK9P50750 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.97■□□□□ 0.95
CDK9P50750 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDK9P50750 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDK9P50750 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CDK9P50750 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.96■□□□□ 0.95
CDK9P50750 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.96■□□□□ 0.95
CDK9P50750 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDK9P50750 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.96■□□□□ 0.95
CDK9P50750 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDK9P50750 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDK9P50750 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDK9P50750 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDK9P50750 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.96■□□□□ 0.95
CDK9P50750 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.96■□□□□ 0.95
CDK9P50750 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.96■□□□□ 0.95
CDK9P50750 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDK9P50750 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CDK9P50750 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDK9P50750 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDK9P50750 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.95■□□□□ 0.94
CDK9P50750 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
CDK9P50750 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDK9P50750 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.95■□□□□ 0.94
CDK9P50750 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.95■□□□□ 0.94
CDK9P50750 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDK9P50750 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.95■□□□□ 0.94
CDK9P50750 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.95■□□□□ 0.94
CDK9P50750 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDK9P50750 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDK9P50750 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.95■□□□□ 0.94
CDK9P50750 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDK9P50750 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDK9P50750 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDK9P50750 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.95■□□□□ 0.94
CDK9P50750 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDK9P50750 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDK9P50750 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDK9P50750 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDK9P50750 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDK9P50750 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CDK9P50750 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.94■□□□□ 0.94
CDK9P50750 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.94■□□□□ 0.94
CDK9P50750 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.94■□□□□ 0.94
CDK9P50750 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CDK9P50750 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDK9P50750 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CDK9P50750 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDK9P50750 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.94■□□□□ 0.94
CDK9P50750 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
CDK9P50750 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CDK9P50750 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDK9P50750 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDK9P50750 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDK9P50750 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CDK9P50750 AC009102.2-201ENST00000606772 1639 ntBASIC20.93■□□□□ 0.94
CDK9P50750 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.93■□□□□ 0.94
CDK9P50750 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDK9P50750 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.93■□□□□ 0.94
CDK9P50750 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDK9P50750 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.93■□□□□ 0.94
CDK9P50750 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDK9P50750 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CDK9P50750 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CDK9P50750 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
CDK9P50750 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.92■□□□□ 0.94
CDK9P50750 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.92■□□□□ 0.94
CDK9P50750 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CDK9P50750 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.92■□□□□ 0.94
CDK9P50750 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDK9P50750 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDK9P50750 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDK9P50750 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.92■□□□□ 0.94
CDK9P50750 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDK9P50750 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.92■□□□□ 0.94
CDK9P50750 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDK9P50750 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDK9P50750 AC073130.3-201ENST00000624389 2278 ntBASIC20.92■□□□□ 0.94
CDK9P50750 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.91■□□□□ 0.94
CDK9P50750 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDK9P50750 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDK9P50750 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms