Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.81■□□□□ 0.92
RORAP35398 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RORAP35398 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.81■□□□□ 0.92
RORAP35398 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.81■□□□□ 0.92
RORAP35398 AC105233.4-201ENST00000642045 216 ntBASIC20.81■□□□□ 0.92
RORAP35398 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RORAP35398 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RORAP35398 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RORAP35398 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RORAP35398 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.8■□□□□ 0.92
RORAP35398 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.8■□□□□ 0.92
RORAP35398 KRT18P5-201ENST00000436075 1291 ntBASIC20.8■□□□□ 0.92
RORAP35398 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.8■□□□□ 0.92
RORAP35398 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.8■□□□□ 0.92
RORAP35398 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.8■□□□□ 0.92
RORAP35398 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.8■□□□□ 0.92
RORAP35398 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.8■□□□□ 0.92
RORAP35398 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
RORAP35398 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
RORAP35398 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RORAP35398 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.8■□□□□ 0.92
RORAP35398 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RORAP35398 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.8■□□□□ 0.92
RORAP35398 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RORAP35398 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.79■□□□□ 0.92
RORAP35398 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RORAP35398 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RORAP35398 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RORAP35398 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
RORAP35398 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RORAP35398 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.79■□□□□ 0.92
RORAP35398 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RORAP35398 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RORAP35398 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RORAP35398 CCDC92B-201ENST00000575506 885 ntBASIC20.79■□□□□ 0.92
RORAP35398 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RORAP35398 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.79■□□□□ 0.92
RORAP35398 AC068587.7-201ENST00000641602 218 ntBASIC20.79■□□□□ 0.92
RORAP35398 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.79■□□□□ 0.92
RORAP35398 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RORAP35398 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.79■□□□□ 0.92
RORAP35398 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.79■□□□□ 0.92
RORAP35398 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.79■□□□□ 0.92
RORAP35398 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RORAP35398 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RORAP35398 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RORAP35398 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RORAP35398 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.79■□□□□ 0.92
RORAP35398 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RORAP35398 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RORAP35398 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
RORAP35398 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RORAP35398 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.78■□□□□ 0.92
RORAP35398 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RORAP35398 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.78■□□□□ 0.92
RORAP35398 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RORAP35398 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
RORAP35398 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.78■□□□□ 0.92
RORAP35398 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.78■□□□□ 0.92
RORAP35398 TERF1P2-201ENST00000583350 1212 ntBASIC20.78■□□□□ 0.92
RORAP35398 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.78■□□□□ 0.92
RORAP35398 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RORAP35398 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.78■□□□□ 0.92
RORAP35398 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RORAP35398 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RORAP35398 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
RORAP35398 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.78■□□□□ 0.92
RORAP35398 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RORAP35398 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RORAP35398 LINC02228-203ENST00000641970 1355 ntBASIC20.77■□□□□ 0.92
RORAP35398 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.77■□□□□ 0.92
RORAP35398 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RORAP35398 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RORAP35398 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
RORAP35398 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.77■□□□□ 0.92
RORAP35398 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RORAP35398 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.77■□□□□ 0.92
RORAP35398 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RORAP35398 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RORAP35398 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.77■□□□□ 0.92
RORAP35398 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RORAP35398 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.77■□□□□ 0.91
RORAP35398 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
RORAP35398 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RORAP35398 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RORAP35398 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.76■□□□□ 0.91
RORAP35398 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RORAP35398 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.76■□□□□ 0.91
RORAP35398 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RORAP35398 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RORAP35398 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
RORAP35398 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
RORAP35398 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RORAP35398 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RORAP35398 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
RORAP35398 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RORAP35398 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.75■□□□□ 0.91
RORAP35398 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
RORAP35398 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.75■□□□□ 0.91
RORAP35398 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms