Protein–RNA interactions for Protein: P26447

S100A4, Protein S100-A4, humanhuman

Known RBP Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S100A4P26447 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
S100A4P26447 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
S100A4P26447 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
S100A4P26447 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
S100A4P26447 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC16.3■□□□□ 0.2
S100A4P26447 WWC2-AS2-201ENST00000578387 2183 ntBASIC16.3■□□□□ 0.2
S100A4P26447 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
S100A4P26447 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
S100A4P26447 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
S100A4P26447 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
S100A4P26447 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
S100A4P26447 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
S100A4P26447 IDNK-201ENST00000376417 511 ntTSL 5 BASIC16.3■□□□□ 0.2
S100A4P26447 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
S100A4P26447 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
S100A4P26447 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
S100A4P26447 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.3■□□□□ 0.2
S100A4P26447 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
S100A4P26447 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
S100A4P26447 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC16.3■□□□□ 0.2
S100A4P26447 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
S100A4P26447 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
S100A4P26447 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
S100A4P26447 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
S100A4P26447 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC16.3■□□□□ 0.2
S100A4P26447 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC16.3■□□□□ 0.2
S100A4P26447 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
S100A4P26447 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
S100A4P26447 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
S100A4P26447 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
S100A4P26447 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC16.29■□□□□ 0.2
S100A4P26447 AC092053.2-201ENST00000640557 1818 ntBASIC16.29■□□□□ 0.2
S100A4P26447 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
S100A4P26447 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
S100A4P26447 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC16.29■□□□□ 0.2
S100A4P26447 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
S100A4P26447 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
S100A4P26447 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC16.29■□□□□ 0.2
S100A4P26447 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
S100A4P26447 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
S100A4P26447 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
S100A4P26447 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
S100A4P26447 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
S100A4P26447 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
S100A4P26447 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
S100A4P26447 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
S100A4P26447 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
S100A4P26447 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
S100A4P26447 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
S100A4P26447 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
S100A4P26447 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
S100A4P26447 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
S100A4P26447 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
S100A4P26447 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
S100A4P26447 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
S100A4P26447 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC16.28■□□□□ 0.2
S100A4P26447 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
S100A4P26447 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC16.28■□□□□ 0.2
S100A4P26447 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC16.28■□□□□ 0.2
S100A4P26447 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
S100A4P26447 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
S100A4P26447 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
S100A4P26447 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
S100A4P26447 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC16.28■□□□□ 0.2
S100A4P26447 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
S100A4P26447 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
S100A4P26447 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
S100A4P26447 BID-212ENST00000614949 1988 ntTSL 5 BASIC16.27■□□□□ 0.2
S100A4P26447 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
S100A4P26447 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
S100A4P26447 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
S100A4P26447 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
S100A4P26447 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
S100A4P26447 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
S100A4P26447 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
S100A4P26447 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
S100A4P26447 MYB-221ENST00000527615 2381 ntTSL 5 BASIC16.27■□□□□ 0.2
S100A4P26447 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
S100A4P26447 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
S100A4P26447 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
S100A4P26447 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
S100A4P26447 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC16.27■□□□□ 0.2
S100A4P26447 BRD4-212ENST00000630599 726 ntTSL 2 BASIC16.27■□□□□ 0.2
S100A4P26447 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
S100A4P26447 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.27■□□□□ 0.19
S100A4P26447 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
S100A4P26447 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
S100A4P26447 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC16.26■□□□□ 0.19
S100A4P26447 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
S100A4P26447 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
S100A4P26447 REST-206ENST00000612429 1376 ntTSL 5 BASIC16.26■□□□□ 0.19
S100A4P26447 REST-207ENST00000616975 1370 ntTSL 5 BASIC16.26■□□□□ 0.19
S100A4P26447 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
S100A4P26447 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
S100A4P26447 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC16.26■□□□□ 0.19
S100A4P26447 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
S100A4P26447 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC16.26■□□□□ 0.19
S100A4P26447 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC16.26■□□□□ 0.19
S100A4P26447 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC16.26■□□□□ 0.19
S100A4P26447 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms